| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4446 |
|---|
| Symbol | |
|---|
| ID | 4178431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008243 |
|---|
| Strand | + |
|---|
| Start bp | 5872 |
|---|
| End bp | 6804 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638059335 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_666057 |
|---|
| Protein GI | 110347240 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG CCACTCGTAG TTCTCAGATT TCACCGTTGA AGCGGATTTT TAATTCTCCT
AAGTGGGAGA TGTTCTTAGC ATCACCTTTA TCTATTGCTT CGCTTGTCTG GCTTCTATTT
GTGACATTTG TCGCCGTTAT CGGCCCGATA TTCGTTGCCG AGCAAGCTAA CCATCAGGAT
CTGCTTTTAC GCTTTTATCC GCCATTTACG CTCGACGAAG GTGTGAGCTA CGTACTTGGT
GGAGATAGCC TGGGCCGACC AATTCTTCTT CAGCTTATCG TCGGTGCCCG TACCTCCCTG
ATCATTGCAG CGTTCGTCGT GGGGATGTCG GCTTTGCTCG GCTATGCGAT CGGCCTTTAC
TCAGGCTACT TCGGCGGGTG GATCGACAAC ATCCTTTTGC GTCTTGCCGA TATTCTCCAC
ACGGTTCCTT CGATGCTGCT AGCGCTGGTG GTGCTATTTG TCCTGGATCC AAGTATTACC
AACCTGATTG TAGTGCTCGG AATCACACGT ATACCGGTTT ATTTACGCAC AGCGCGGGCG
CAGACGCTGG AGGTTCGCGA GCGAGTGTTC ATAGAAGTCG CCCGCGCGGC CGGAGCGTCT
CATTGGCGGA TTATGACGCG TGACGTGGCT CCGATGGTTT TTCCGACAAT CCGTACGTTG
GCTATGCTCG AGGTCGCCAC CGTCATTCTT CAGGCGGCCA GCCTGACCTT CCTCGGTATC
GGCTTGCAGC GCCCCGACGT CGACTGGGGC ATGATGGTGG CCGATGGTCG CGAATACTTG
CGCAGCGCCT GGTTCGTTAC GGTTTTTCCG GGCATCATAA TCGTCCTCAC CGCACTTGCG
GCCAACCTGT TCTCGAACTG GCTGCGGGCG GTAGAGGACC CTGCACAGAG CATCCACTTC
TTCTCGAAAC CCCGCCGCCA AAAGGCTGAA TAG
|
|---|
| Protein sequence | MTIATRSSQI SPLKRIFNSP KWEMFLASPL SIASLVWLLF VTFVAVIGPI FVAEQANHQD
LLLRFYPPFT LDEGVSYVLG GDSLGRPILL QLIVGARTSL IIAAFVVGMS ALLGYAIGLY
SGYFGGWIDN ILLRLADILH TVPSMLLALV VLFVLDPSIT NLIVVLGITR IPVYLRTARA
QTLEVRERVF IEVARAAGAS HWRIMTRDVA PMVFPTIRTL AMLEVATVIL QAASLTFLGI
GLQRPDVDWG MMVADGREYL RSAWFVTVFP GIIIVLTALA ANLFSNWLRA VEDPAQSIHF
FSKPRRQKAE
|
|---|
| |