| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4432 |
|---|
| Symbol | |
|---|
| ID | 4178570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | + |
|---|
| Start bp | 333969 |
|---|
| End bp | 334940 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638059323 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_666045 |
|---|
| Protein GI | 110347227 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGATA ATGCTGCCGT GATATGTACA TTATGCGCTG GTGTTATTAT GCATCTTGGA
GAGCTTGAGG CCTTCGATGC CGTTATGCGG ATGGGGAGCA CAAACCGGGC TGCCGACTTC
CTGGGCATCA GCCAGCCGGC GGTCAGTCGG GCCATTGGCC GCCTCGCGAG ATCCACAAGG
CTGACGTTGT TCCGACAGGT TGGCGGACGT CTCGTGCCGA CGCCTGAGGC ATTGAGCCTA
CACGAGGAGG TACAGCGCGC CTTTGTTGGC CTCGATCAAA TACGCGCCCG CGCCGCGATG
ATACGTGAAT TCGGCGCCGG GGGGCTTCGG CTGGCCTGCT ATCCCGCGCT CGGTCTGTCC
TTCGCACCCA AGGCGATCCA GCGATATCGA ACCAGGGACC GTTCGGGACA TGTGACCCTC
CTGATCGCAG GTTCAAACGC CGTGCGCGAC ATGGTCGCCT CCGGTCAGGC GGATGTTGGG
CTGGCTGCCG ACGAAATCGA CGTGTCGCGC GTCTCCACAC AGCCCTTCAT GTCCGCACCC
GCCGTGTGCG TCATGCCGGT AGGCCACCGC TTGTCCAGCC ACGAAACTGT TTCGCCCAGT
GACCTCGCCG GAGAACCGTT CATTGCCCTT TCACCGGATG ACACCGTTCG TAGGCGGATC
GAGCGCATCT TCGAAGAAGC GGGCATGCAG GCGCGCACTG TGGTCGAGAC GCAATACTCA
GAGGTGGTCT GCAATCTGGC GCTCGAAGGC GTCGGTGTTG GAATTGCCAA CTCCATGACG
TTCAGGGCCA GCAAATTCGA ACAGCGTGGC TTGGTCGCTC GCCCTTTCCA TCCCAAGATT
GCATTCAAGG CTCTGGTCCT CACAGCAAAG GAGCGATTGA AGTCCGCCCA AACACAAGCC
CTTGTTGCGG CGCTTCATGA CATACGAAAT CAATTCAGTA TCATGACCGC ACCTGCCAGG
ACTGGTGACT AG
|
|---|
| Protein sequence | MCDNAAVICT LCAGVIMHLG ELEAFDAVMR MGSTNRAADF LGISQPAVSR AIGRLARSTR
LTLFRQVGGR LVPTPEALSL HEEVQRAFVG LDQIRARAAM IREFGAGGLR LACYPALGLS
FAPKAIQRYR TRDRSGHVTL LIAGSNAVRD MVASGQADVG LAADEIDVSR VSTQPFMSAP
AVCVMPVGHR LSSHETVSPS DLAGEPFIAL SPDDTVRRRI ERIFEEAGMQ ARTVVETQYS
EVVCNLALEG VGVGIANSMT FRASKFEQRG LVARPFHPKI AFKALVLTAK ERLKSAQTQA
LVAALHDIRN QFSIMTAPAR TGD
|
|---|
| |