| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4428 |
|---|
| Symbol | |
|---|
| ID | 4178566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | - |
|---|
| Start bp | 329391 |
|---|
| End bp | 330479 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638059319 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_666041 |
|---|
| Protein GI | 110347223 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0906508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CAGCGTCCAA TACGATCGCG CGTACCGCCG GGCCTGACAT GCGCTCACTG
CTTCGTCGGC TCGCGCCGTT CTTCGGCACG CCGCTCAATG CCGCCCTGAC AGTCGTCCTG
CTTTGGCTGA TGGCCCGGTT CGGGTGGCTA CTGCTGGACT GGGCAGTCCT CAAGGCCGCC
ATTTTCCCTG CCGAACCGGA AACATGCGTG GGCAAGACCG GAGCCTGCTG GAGCTTCGTG
ATCGCCAAGT CCGGCCAGAT CCTGTTCGGC ATCTATCCGC CGACGGAGCG ATGGCGCGCC
GGGCTGGTAT GCGTCCTCAT CATCACGACG CTCGTCGCAT CGGCACGGCC TTCCGCATGG
CGGCCCAGCC TGGGACTCGT CTGGGTCGCC ATGATGGTGG TGGTCCTGTG GCTGATGGGT
GGCGGCTTCG GGTTGGCCGC TGTGCCCACA AGCTCATGGG GCGGATTGCC GGTGACGCTG
ATCCTCACGG TCTTTGCCAT TGGACTCGGC TTTCCGGCCG CCATCCTGCT CGCGCTGGGC
CGCAGGTCGA ACCTGCCGGT CGTCCGCACC CTGAGTGTGC TCTTCATTGA GACTATACGT
GGGCTGCCAC TGCTCAGTCT GCTTCTCGTG GCGTCCATCC TGCTGCCGCT GTTCCTGCCG
GAGGCGCTCC TCCCGGACAA GTTCGTGCGC GCGTTAATTG CGTTGACCAT CTTTGCCGCC
GCCTACCTCG CGGAGGTTCT ACGCGGCGGC CTGCAGTCAA TCCCGAGCGG CCAGTCGGAA
GCGGCCGAGG CCCTCGGCTT AGGCTACTGG AAGACGCAAA GGCTGATCAT CTTGCCTCAG
GCGATCCGGA TCGTCATACC GGCGCTGACC AACACGATCA TCGTGATGAT CAAGAACACA
AGTCTCGTGC TGGTGGTCGG CCTGTTCGAC CTGATCAGCT CAGGCAAGGC GGCACTCTCC
GACCCTGCAT GGCCGGCGCC TTCCACCGAA ACCTTTCTCT TTATCGGCTT GATCTACTTC
GCGCTCGCCT TTTCGTTCGC GCGATTTGCA GATTTCCTTG AACGCAGCGG CGCGGAGAAG
CGTGGATGA
|
|---|
| Protein sequence | MADTASNTIA RTAGPDMRSL LRRLAPFFGT PLNAALTVVL LWLMARFGWL LLDWAVLKAA
IFPAEPETCV GKTGACWSFV IAKSGQILFG IYPPTERWRA GLVCVLIITT LVASARPSAW
RPSLGLVWVA MMVVVLWLMG GGFGLAAVPT SSWGGLPVTL ILTVFAIGLG FPAAILLALG
RRSNLPVVRT LSVLFIETIR GLPLLSLLLV ASILLPLFLP EALLPDKFVR ALIALTIFAA
AYLAEVLRGG LQSIPSGQSE AAEALGLGYW KTQRLIILPQ AIRIVIPALT NTIIVMIKNT
SLVLVVGLFD LISSGKAALS DPAWPAPSTE TFLFIGLIYF ALAFSFARFA DFLERSGAEK
RG
|
|---|
| |