Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4427 |
Symbol | |
ID | 4178565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 328630 |
End bp | 329394 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638059318 |
Product | ABC transporter related |
Protein accession | YP_666040 |
Protein GI | 110347222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.120026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATG TTGAGAGGCA GACGGATCGC GGCGCGGCGA TCAAGATCGA AAATCTCGGC AAGTCCTTCG GCGATTTCCA GGCGCTTCGG AATGTGACGC TGACGGTCGC CCAAGGCGAA AGGATCGTCA TCTGCGGCCC GTCGGGTTCG GGCAAATCCA CGCTCATAAG AACGATAAAC CGGCTGGAAC AGCACCAGAC CGGCCGGATC GTGGTGGAAG GCACCGAGTT GACGAACGAC CTCAAGGGGA TCGAGAAGAT CCGCTCGGAG GTCGGCATGG TGTTTCAGCA TTTCAACCTC TTTCCTCACC TGACGGTCCT CGAGAACTGT ACGCTTGCAC CCATCTGGGT GCGGAAGCTG CCTCGGGAGG AAGCCAAGGA GACCGCCATG CATTTCCTGC GCAAGGTCCG CATACCCGAA CAGGCAGGCA AATATCCGGG GCAGCTTTCA GGCGGCCAGC AGCAACGCGT CGCTATCGCG CGGGCCTTGT GCATGAGGCC GCGGATCATG CTGTTCGATG AGCCGACGTC CGCGCTCGAT CCCGAGATGA TCAAGGAAGT GCTCGACACC ATAATCGGAC TGGCGAACGA GGGCATGACA ATGGTGTGCG TGACGCATGA GATGGGCTTC GCACAGGCAG TCGCCGATCG TGTGGTGTTC ATGGACGGAG GCCAGATCGT CGAGGAGAAC GTACCGGCCG CTTTCTTCTC ATCACCTCGC AACGAACGGA CGAAGCTGTT TCTCAGCCAG ATACTTGGGC AGTGA
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Protein sequence | MKNVERQTDR GAAIKIENLG KSFGDFQALR NVTLTVAQGE RIVICGPSGS GKSTLIRTIN RLEQHQTGRI VVEGTELTND LKGIEKIRSE VGMVFQHFNL FPHLTVLENC TLAPIWVRKL PREEAKETAM HFLRKVRIPE QAGKYPGQLS GGQQQRVAIA RALCMRPRIM LFDEPTSALD PEMIKEVLDT IIGLANEGMT MVCVTHEMGF AQAVADRVVF MDGGQIVEEN VPAAFFSSPR NERTKLFLSQ ILGQ
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