| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4375 |
|---|
| Symbol | |
|---|
| ID | 4178801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | - |
|---|
| Start bp | 275589 |
|---|
| End bp | 276419 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638059270 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_665992 |
|---|
| Protein GI | 110347174 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GCGAGCACAA GCTATCCGTC GTGCGCCAGG CGAAGCTTCT CGGCTTCAGC
CGTGGCAGCG TCTACTATCT GCCTCGTCCG GTGTCTGACG GCGATCTGGC CCTTATGCGC
CGGATTGACG AATTGCATCT CGACTACCCC TTTGCCGGAA GTCGGATGTT GCAAGGGCTC
TTGAGAGGAG AAGGTCTGGA GACCGGGCGG CGACACGTCG CCACGCTGAT GAAGAAGATG
GGCATCGAGG CGATCTACCG CCGCCCGAAC ACCTCGAAAC CAGCGCCAGG GCACAAAATT
TATCCCTACC TCCTACGAAA GCTGGCAGTC ACCCGGCCCA ATCAGGTCTG GGCAATGGAC
CTGACCTACA TCCCCATGGC GCGGGGATTT GTCTATCTGT GCGCCGTCGT GGACTGGTTC
AGCCGGAAGG TCTTGTCATG GCGGTTGTCG ATCACGATGG AAGCAGCCTT CTGCATCGAG
GCGGTGGAGG AGGCACTTGC CCGTCATGGC AGGCCGGAAA TCTTCAATAC CGACCAGGGA
TCGCAGTTCA CCTCCATCGA CTTCACCGCC GTGCTGAAGA GGTCACAGAT CGCCATCTCG
ATGGATGGCA AGGGTGCGTG GCGAGACAAT GTCTTCGTCG AGCGGCTCTG GCGTTCGATC
AAATACGAGG AAGTCTACCT CCATGCCGAT AAGACTGTGT CCGAGGCACG CGCTGGCATC
GGCCGATATC TGAACTTCTA CAACACCAGA CGCCCACATT CATCCCTTGA CCGGCGGACG
CCGGATCAGG CCTACTTCAA CGCGCTGACA CCAATGATGG TGGCGGCATA A
|
|---|
| Protein sequence | MIDREHKLSV VRQAKLLGFS RGSVYYLPRP VSDGDLALMR RIDELHLDYP FAGSRMLQGL
LRGEGLETGR RHVATLMKKM GIEAIYRRPN TSKPAPGHKI YPYLLRKLAV TRPNQVWAMD
LTYIPMARGF VYLCAVVDWF SRKVLSWRLS ITMEAAFCIE AVEEALARHG RPEIFNTDQG
SQFTSIDFTA VLKRSQIAIS MDGKGAWRDN VFVERLWRSI KYEEVYLHAD KTVSEARAGI
GRYLNFYNTR RPHSSLDRRT PDQAYFNALT PMMVAA
|
|---|
| |