Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4345 |
Symbol | |
ID | 4178829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 246237 |
End bp | 246932 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638059240 |
Product | type IV secretion system |
Protein accession | YP_665962 |
Protein GI | 110347144 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTATGC GCAAATCGAT GATGGCTGCC GCCATCCTTG TCCTGTCGGC CAGCGGCGCC GGCGCGCAAG GGATTCCCGT GATCGACCAG ACGGCGATCC TGAAGCACAT TGAGAGCATC ACCCAGCTCA AGTCGCAGCT TGACGCGCTC AATCAGCAAA TCACCCAAGC CGAGCAATTG TTCGGATCGC TGAACAAGCT GACGAACATG GCCGATGTTG TTTCCCTCCT GAACCAGCCG GAAATCCGCA AAGCCTTACC GCAAGACTTT GCGGCGATCG AAAGCCTGCT CAGCGGCAAC GGCTCGGGTG CGTTCGGCGA TGCCGCCTCG AAATTCCTCG GCGAGAACTC GACCTACCAG ACCTCGGCCA ACGATTTCTA CGCCCAGGAA CTGGCGCGCG TTCAGAACCG CAATGCCGGC CAAATGAGCC TTGGCCAGCA GATTTACGAT GCCGCCACCA AGCGCATCGA TGGGATCGAT CAGTTGCGCC AGCAGATATC GTCGGCAAGC GATGCCAAGG ACATCGCCGA TCTCCAGGCG CGCATTCAGG CCGAAAGTGC CTTCCTGCAG ACCGATCTCC TTAGGATGCA GGGGCTGCAG ATGGTCCAGC AGGCGCAGGC CCAGGTCGAG GATCAGCGCA AGGCGGAAGA CTGGCGCAAG CGCATCGACA CGATGAACAC GGCGCTGTCG CAATGA
|
Protein sequence | MRMRKSMMAA AILVLSASGA GAQGIPVIDQ TAILKHIESI TQLKSQLDAL NQQITQAEQL FGSLNKLTNM ADVVSLLNQP EIRKALPQDF AAIESLLSGN GSGAFGDAAS KFLGENSTYQ TSANDFYAQE LARVQNRNAG QMSLGQQIYD AATKRIDGID QLRQQISSAS DAKDIADLQA RIQAESAFLQ TDLLRMQGLQ MVQQAQAQVE DQRKAEDWRK RIDTMNTALS Q
|
| |