| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4343 |
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| Symbol | |
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| ID | 4178827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 245103 |
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| End bp | 245999 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638059238 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_665960 |
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| Protein GI | 110347142 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCG TCTTCGGCTT TCTCGATCGC CAGTTCACGA CGCCGCTCCA GAACTTCATC
AGTTCCGGTA CAAGCGGGAT CAGCGCGTGG GTGACGGGGC CGTTGACAGC AGCGCTGACA
CTCTACGTGA TCCTTTACGG TTTCCTGATC CTGCGCGGAT CGGTGCAGGA ACCGATCATG
GAGTTTGCCT TCCGGGCGAT AAAGCTCGCC ATCATACTGA TGCTGGTGAG GAACGCCGGC
GAATATCAGA CCTATGTGAC TAACGTCTTT TTCGAGATTC TGCCCAGGGA AGTTTCCGAA
GCACTGAATA CCGGCGGCGC GCCGAGCGCT ACGACCTTCG ACAGTCTGCT CGACAAGGGT
CAGAAATCCG CCAATGATAT TTGGGCACAG GCCTCATGGC CGGTCGATCC GCTGACCGGT
TTTGCCGGTC TTGTCGTCGT GTTTGTGACT TTTGTCGTGG CCTCGATCGG CTATGTTGTT
TCACTCTATG CGCGGGTCGC CCTTGCGATC GTTCTCGCGA TCGGACCGAT CTTCATCGCA
CTGGCCATGT TCCAGTCGAC ACGCCGCTTC ACCGAGGCGT GGATCGGGCA GCTCGCCAAC
TTCGTCATTC TGCAGGTTCT GGTTGTCGCG GTCGGCTCGC TGCTGGTCAC CAGCTTCGCG
ACCATGTTTA CGACTGTCGA GGCTTACAGC GACGTCCTGA TGCGCCCGAT CGCCGTCGGC
GCCATCGGGC TTGCGTCACT GTACGTCTTT TATCAGCTGC CAGGTATTGC CTCGGCGCTC
GCCTCCGGCG GTGCCTCGCT GACCTATGGC TATACCGCGG CGCGCGATGG GCACAACAAC
ACCGTAGTGC GCGCGATCGG TTGGAGTTGG CGCAGGCTGA CCGGCAGAGG AGCCTGA
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| Protein sequence | MYTVFGFLDR QFTTPLQNFI SSGTSGISAW VTGPLTAALT LYVILYGFLI LRGSVQEPIM
EFAFRAIKLA IILMLVRNAG EYQTYVTNVF FEILPREVSE ALNTGGAPSA TTFDSLLDKG
QKSANDIWAQ ASWPVDPLTG FAGLVVVFVT FVVASIGYVV SLYARVALAI VLAIGPIFIA
LAMFQSTRRF TEAWIGQLAN FVILQVLVVA VGSLLVTSFA TMFTTVEAYS DVLMRPIAVG
AIGLASLYVF YQLPGIASAL ASGGASLTYG YTAARDGHNN TVVRAIGWSW RRLTGRGA
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