Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4317 |
Symbol | |
ID | 4178744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | + |
Start bp | 218958 |
End bp | 220697 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638059212 |
Product | plasmid partitioning protein |
Protein accession | YP_665934 |
Protein GI | 110347116 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTGA AGTTTGTCGA TCCGCGCGCG CTGAAGGGAA ACCCCGACAA GGCGCGTCGT TCCAAGTCCA GTCCGCAGGC TGACGCATTG CTGCTGGCGA CGATCCGCGC CGTCGGTATC GTGCAGCCGC CTGTCGTTGC ACCGGAATCC GATGGTGGCA ACGGCTTCGT CATCGATGCC GGCCATCGCC GCGTCAAGCA GGCCATCGCC GCAGGCCTTG AAGAGATCGC CGTGCTGGTG ATCGAGCGTG CCGAGGATGG CGGCGCAATG CGCTCGCTCG CAGAAACGCT GGCGCATGAG CAGCTCAATC CCGTCGATCA GTGGCGGGCG ATCGAGCGCC TGGTCGCGCT CGGCTGGACC GAGGAAGCGA TCGCTGTCGC CTTGGCCTTG CCGGTTCGCC AGATCCGCAA GCTGCGTCTG CTCGCCAATG TCCTACCGGC GATGCTCGAC CAGATGGCCA AAGGCGACAT GCCCAATGAG AGCCAGCTGC GCACCATCGC GTCGGCCTCG CTCGACGACC AGAAGGAGGT CTGGAAGAAG CATAAGCCCT CGAAGGCCGA CCCGCAGGTC TCCTGGTGGA GTGTCGCGCA AGGCCTACAG AAGACCCGCA TGTATGCCCG CGATGCGAGC TTCGGCGAGG ATCTCGCCCA GGCCTACGGC ATTGCCTGGG TCGAGGACCT GTTTGCACCG GCCGATCAGG ACAGCCGCTA CACGACCGAC GTCGAGGCAT TCCTGGGCGC GCAGCAGGAG TGGATGACGC AGAACCTGCC CAAGAAGGGG GTCATCACCG AGACCAACAA CTGGGGCCAG CCGGAACTGC CGAAGAAGGC GGAGCGCGTC TATGGCAAGC CGGGCAAGTC CGACCATACG GCCCTGTACC TAGACCGCGA GGGGAAGGTT CAGACGGTGC ACTTCCGCAT GGCGGAGGCG AAGAAGCCGA AGAAGGGCGA ACAGCCGGCG GGCGAGGGTG ACGATACTGC GATCGTCGTG AAGACCCGCC CCGATGTCAC CCGCAAGGGC ATCGAAATGA TCGGTGATCT GCGCACCGAT GCTCTGCATG AAGCGCTGTC GCGGGCTCCG ATCGAGGACG ACACGTTGAT GGCGTTGTTG GTCCTGGCGT TCGCGGGACA GAACGTGACG GTGGCGTCCG GCACGCGCGA CATCTCCTAC TACGGGGCGG CCGGCCTTGG CGAACATGCC GCGCGCCTGT TCGACGAGGA GGGCAAGCTC GACTTCGACA TGGAAACGCT TCGGGTTGCC GTGCGCTCGC TGCTGATCGA CGTCTTGTCG TGCAGGGAAA ACCGTTCGGA CAGTGGCATC GTTTCCCGCG TTGCTGGCGA TGTGATCGGC GCCGACGGCT TCCTGCCGAA CATGGGCACG GAGGAGTTCC TCTCCTGCCT GTCGCGACCG GCGCTGGAGG CGTCGTGCGC CGACACGTCG GTTCTTCCCC GGCAGAAGAT CAAGGACACC CGCGCGGCCC TGGTCGAGCA CTTCAAGGAA GGTCGCTTCG TCCATCCGTC GGCGCTGTTC GGTCCCGACC AGACCAAGCT CGCGTCGTGG CTGAAGAAAA ACGAGCGCGT CGAGCAGCCT GAAGATGACG GCACGCCGGA AGGCGAGGAC GAGCTCGACG GCGATGCGGT CGTCGAGCCG GCGCATGACT ATGTCGATGA AGATCAGGCT GCGGCCGACC AGGACCTCAC CGACGAGCAG CGCGAGGCCT ACAAGGTGGC CGCCGAGTAA
|
Protein sequence | MELKFVDPRA LKGNPDKARR SKSSPQADAL LLATIRAVGI VQPPVVAPES DGGNGFVIDA GHRRVKQAIA AGLEEIAVLV IERAEDGGAM RSLAETLAHE QLNPVDQWRA IERLVALGWT EEAIAVALAL PVRQIRKLRL LANVLPAMLD QMAKGDMPNE SQLRTIASAS LDDQKEVWKK HKPSKADPQV SWWSVAQGLQ KTRMYARDAS FGEDLAQAYG IAWVEDLFAP ADQDSRYTTD VEAFLGAQQE WMTQNLPKKG VITETNNWGQ PELPKKAERV YGKPGKSDHT ALYLDREGKV QTVHFRMAEA KKPKKGEQPA GEGDDTAIVV KTRPDVTRKG IEMIGDLRTD ALHEALSRAP IEDDTLMALL VLAFAGQNVT VASGTRDISY YGAAGLGEHA ARLFDEEGKL DFDMETLRVA VRSLLIDVLS CRENRSDSGI VSRVAGDVIG ADGFLPNMGT EEFLSCLSRP ALEASCADTS VLPRQKIKDT RAALVEHFKE GRFVHPSALF GPDQTKLASW LKKNERVEQP EDDGTPEGED ELDGDAVVEP AHDYVDEDQA AADQDLTDEQ REAYKVAAE
|
| |