| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4299 |
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| Symbol | |
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| ID | 4178880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 198627 |
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| End bp | 199220 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638059194 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 1 |
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| Protein accession | YP_665916 |
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| Protein GI | 110347098 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.651923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACTA GGGCAGAAGG GCTGGACGAC ACGCCGATAC GAAGGAAAGG ACGTCACCCC
CCGGACGAGC AAAACTTGAT CCTGGTTGAC GCAAACGACC GCGCTGTCGG CAGCGCAGGA
AAGCTGATCG TTCACCAGAG GAACATGCGC CACCGCGCCA TTTCGGTGCT GATCTTTGAT
AGCGCCGGCC GGATGCTGCT GCAGCGTCGC AGCGCAGCGA AGTATCATTC AGGAGGCTTG
TGGACCAACG CCTGCTGCAG CCATCCGCGG CCGGGCGAAT CTCCGGCCCA TGCCGCCGAG
CGCCGCCTGG GAGAGGAGAT GGGATTCGTC GTCCCGCTCA GCTTTGTGTG CCGGTTCCAG
TACGGCGCGC CAGTTGGAAA CGGGCTATGG GAAAATGAGA TCGTGCACGT CTTCTCGGGA
CTCTACGACG GCGAGATCGT GCCCGATGCG GACGGGGCCG ACGATTTCCG CTGGCAGGCT
CTGGCCTCTA TCCGGGACGA CATTGCCACG CGAGCGGACC ACTATACGGC CTGGTTCAGG
CTCTACGAGA AGGCAAGCTG GTTCGAAAAG CAGCGACAGG CAGCGGTGCC CTGA
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| Protein sequence | MITRAEGLDD TPIRRKGRHP PDEQNLILVD ANDRAVGSAG KLIVHQRNMR HRAISVLIFD
SAGRMLLQRR SAAKYHSGGL WTNACCSHPR PGESPAHAAE RRLGEEMGFV VPLSFVCRFQ
YGAPVGNGLW ENEIVHVFSG LYDGEIVPDA DGADDFRWQA LASIRDDIAT RADHYTAWFR
LYEKASWFEK QRQAAVP
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