| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4280 |
|---|
| Symbol | |
|---|
| ID | 4178623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | - |
|---|
| Start bp | 182795 |
|---|
| End bp | 183259 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638059175 |
|---|
| Product | SEC-independent protein translocase protein TatC |
|---|
| Protein accession | YP_665897 |
|---|
| Protein GI | 110347079 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC AATCCGCTGG CAGGACAACG ATCATCGTCG ACGGCGTCCC GTTGCCGGAA
ATCCTGGACG AACGCATGAT CCACGACGTG GTGCATGGCT TCTATGAGGA GATCCGCAAC
GACGATCTCC TGGGGCCGAT CTTCAACGGT GCGATCAACT CCGAGGCCTG GCCGCACCAT
CTTGCAAAAA TGTGCGATTT CTGGTCGGCG ACGTTGCTGC GCACGAAACG CTACGAGGGC
CGGCCGTTGC CGCCGCATCT GGCCATTCCT GGCTTGGGCG AGGTGCATTT CCGCCGTTGG
CTGATGCTCT TCCGTGCCAC CGTTGACAGG CTCTGCCCAG CGGATGTTGC GGTCCTCTTC
ATGGATCGCG CGCTGCGCAT CGCCCATTCC TTCCGCCTTG CGGTCGCGTT CAGCCGTGGC
GACGACACGC TCGCGGTCCA GCCCATCCTC AAGGAAAGCC TCTGA
|
|---|
| Protein sequence | MSKQSAGRTT IIVDGVPLPE ILDERMIHDV VHGFYEEIRN DDLLGPIFNG AINSEAWPHH
LAKMCDFWSA TLLRTKRYEG RPLPPHLAIP GLGEVHFRRW LMLFRATVDR LCPADVAVLF
MDRALRIAHS FRLAVAFSRG DDTLAVQPIL KESL
|
|---|
| |