| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4266 |
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| Symbol | |
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| ID | 4178601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 168433 |
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| End bp | 171279 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638059161 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_665883 |
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| Protein GI | 110347065 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACA CCCCGACAGG CTACGCACCG TACGACTTCG CAAACCGCCG CCACATCGGC
CCCTCCCCGC GCGAAATGGC GGAGATGCTG GAAACTGTCG GAGCCGAAAG CCTCGATGCC
TTCATCGACG CAATCGTTCC CGCAGACATC CGGCAGACGC GCCCGCTCGC CTGGGGCAAG
GCCCTTTCCG AGCGCGGCGT TCTGGAACGG CTGCGCAACG TGGCCAAGAA GAACAAGCCC
AATGCCAGCT TCATCGGACA GGGCTACCAC GGCACCTTCA CCCCGCCGGC GATCCAGCGC
AACATCTTCG AGAACCCGGC CTGGTACACC GCCTACACGC CCTATCAGCC CGAGATCAGC
CAGGGCCGGC TTGAGGCGCT GCTCAATTAT CAGACCATGA TGACCAATCT GACCGGGCTC
GACATCGCCA ATGCGTCGTT GCTCGATGAA GGCACCGCCG CCGCCGAAGC CATGGCCCTG
TGCGAACGTG CGTCGCGCAC CAAGGCCCGC GCCTTCTTTG TCGACCATCA TTGCCATCCG
CAGACAATCG CCGTGGTTGC GACCCGGGCG GAGCCGCTTG GATGGGAAGT GATCGTCGGC
GATCCCTTCA CCTATCTCGA TCCGTCGCGC GTTTTCGGCG CCCTGTTTCA GTATCCCGGC
ACCTATGGCC ATGTGCATGA CTTCACCGCT CCGATCGCAG CGCTCAAGGA CGCTGGCGCC
CTTGCCGTGG TGGCCGCCGA CCCGCTGGCG CTGACCCTGT TGAAGCCACC GGGCGAGATG
GGCGCCGACA TCGCCATCGG CTCCAGCCAG CGTTTCGGCG TGCCCCTGGG CTATGGCGGT
CCGCACGCCG CCTACATGAC CGTGCGTGCC AACCTCGCGC GGTCGATGCC GGGCCGGATC
GTCGGCGTCT CCATCGACGC CCGCGGCAAT CGCGCCTATC GGCTGTCGCT GCAGACGCGC
GAACAGCATA TCCGCCGCGA GAAGGCGACA TCCAATGTCT GCACCGCGCA GGCGCTACTG
GCCGTCATGG CCTCGATGTA CGGCGTCTTC CACGGACCCG ACGGATTGCG GGCGATCGCC
GAGCGCATCC ACCGCAAGAT CGTGCGGCTG GTCAAGGGAC TGGAAACCCT TGGCTTCCCA
ATCGAACCGG TAAGTTTCTT CGACACGGTG ACAGTGGAAT GCGGCCCCCG CCGCGACGCC
ATCCTGGCAT CCGCCCTGCG CGAAGGGATC AACCTTCGCC CGATCGGCGA GACGCGGATC
GGCATCACTT TCGACGAGAC TGTCCGGCGC AGCCACACCG AGGCGATCTG GCGTGCTTTT
GGCGGCGGCA TGGCCGACGA CGACATGACG CCTGACTACC GCCTGCCCGA GGCTCTGCTA
CGAACCTCGA GCTTCATGAC CCACCCGGTC TTCCACATGA ACCGCGCCGA AGCCGAGATG
ACGCGCTACA TGCGCCGCCT CGCCGACCGC GACCTTGCGC TTGACCGGGC AATGATCCCG
CTCGGCAGCT GCACCATGAA GCTCAATGCC ACCGCCGAAA TGATGGCGTT GAGCTGGCCG
GAATTCGCGA ACATGCACCC CTATGCCCCC GCCGATCAGG CACAGGGTTA TGCCGAGATG
CTGAGCGACC TCGAGGCGAA ATTGTGCCAG ATCACCGGCT ATGACGCATT TTCGATGCAG
CCGAATTCGG GTGCCCAGGG CGAATATGCC GGTCTATTGA CGATCCGCCG CTATCACGAG
GTGCAGGGCG ACGGGCATCG CAACATTTGC CTGATCCCGA CCTCGGCGCA TGGCACCAAT
CCGGCTTCCG CACAGATGGC TGGCATGAAG GTGGTGGTGG TCGGCGTGGC CGCCGACGGC
AACATCGACG TCGCCGACTT CCGCGCCAAG GCCGAAGCCC ATGCCGAAAA CCTCGCGGCT
TGCATGATCA CCTACCCCTC GACCCACGGC GTGTTCGAGA CGACCGTTCG CGAGATCTGC
GACATCACCC ATGCGAATGG CGGACAGGTC TATATCGACG GCGCCAACAT GAACGCCATG
GTCGGCCTGG CGCGCCCCGG CGATATCGGC GGCGACGTAA GCCATCTCAA CCTGCACAAG
ACCTTCGCCA TCCCGCATGG CGGCGGCGGA CCAGGCATGG GACCGATCGG CGTCAAGGCG
CATCTTGTGC CGCATCTGCC AGGCAACCCG CCTGCCGGCA AGTTCGCCAT CTCGGCCGCA
CCGTTCGGCT CCGCCTCGAT CCTGCTCATT TCTTGGGCCT ATTGCCTGCT GATGGGTGGT
GAGGGCCTGA CCCAGGCGAC CAAGACCGCG ATCCTGAGCG CCAACTACAT CGCGCGGCGA
CTGGCATCCG CCTACCCGAT CCTCTACAGC TCAGCCGCCG GCCACGTCGC GCATGAATGC
ATTCTCGATA CGCGAGTGCT GAAGGAGCGC GCCGGGGTGA CCGTCGACGA CATCGCCAAG
CGTCTTGTCG ACTGCGGCTT CCACGCGCCG ACGATGAGCT GGCCAGTGGC CGGCACACTG
ATGGTAGAGC CGACGGAAAG CGAGCCCAAG GCCGAGCTCG ATCGCTTCAT CGAGGCCATG
CTGGGCATCG CCGCCGAAGC GGAAGCGATT GCCGCCGGCA CCCTGGACGC CCAGGACAAC
CCGCTGAAGC GCGCGCCCCA TACCGTCGAG GATCTCGTCG GCGAATGGGA CCGGCTCTAC
AGCCGCGAGG CCGCCTGCTT CCCGGCAGGC TCGTTCCGCA CCGACAAATA TTGGCCGCCC
GTCAACCGGA TCGACAATGT CCATGGCGAC CGCAACCTTG TCTGCACCTG CCCGCCGCTC
GAAAGCTACG CGGAAGCTGC CGAGTGA
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| Protein sequence | MSYTPTGYAP YDFANRRHIG PSPREMAEML ETVGAESLDA FIDAIVPADI RQTRPLAWGK
ALSERGVLER LRNVAKKNKP NASFIGQGYH GTFTPPAIQR NIFENPAWYT AYTPYQPEIS
QGRLEALLNY QTMMTNLTGL DIANASLLDE GTAAAEAMAL CERASRTKAR AFFVDHHCHP
QTIAVVATRA EPLGWEVIVG DPFTYLDPSR VFGALFQYPG TYGHVHDFTA PIAALKDAGA
LAVVAADPLA LTLLKPPGEM GADIAIGSSQ RFGVPLGYGG PHAAYMTVRA NLARSMPGRI
VGVSIDARGN RAYRLSLQTR EQHIRREKAT SNVCTAQALL AVMASMYGVF HGPDGLRAIA
ERIHRKIVRL VKGLETLGFP IEPVSFFDTV TVECGPRRDA ILASALREGI NLRPIGETRI
GITFDETVRR SHTEAIWRAF GGGMADDDMT PDYRLPEALL RTSSFMTHPV FHMNRAEAEM
TRYMRRLADR DLALDRAMIP LGSCTMKLNA TAEMMALSWP EFANMHPYAP ADQAQGYAEM
LSDLEAKLCQ ITGYDAFSMQ PNSGAQGEYA GLLTIRRYHE VQGDGHRNIC LIPTSAHGTN
PASAQMAGMK VVVVGVAADG NIDVADFRAK AEAHAENLAA CMITYPSTHG VFETTVREIC
DITHANGGQV YIDGANMNAM VGLARPGDIG GDVSHLNLHK TFAIPHGGGG PGMGPIGVKA
HLVPHLPGNP PAGKFAISAA PFGSASILLI SWAYCLLMGG EGLTQATKTA ILSANYIARR
LASAYPILYS SAAGHVAHEC ILDTRVLKER AGVTVDDIAK RLVDCGFHAP TMSWPVAGTL
MVEPTESEPK AELDRFIEAM LGIAAEAEAI AAGTLDAQDN PLKRAPHTVE DLVGEWDRLY
SREAACFPAG SFRTDKYWPP VNRIDNVHGD RNLVCTCPPL ESYAEAAE
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