| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4249 |
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| Symbol | |
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| ID | 4178655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | + |
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| Start bp | 149387 |
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| End bp | 152368 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638059148 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_665870 |
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| Protein GI | 110347052 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.496909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA CTTCGACATT GAGGGACCAA CTCGACAAAG AAAGAAATCT GACCCGTCCA
GGCCCTCCCA AAGCGCCGTC AAATCCGTTT TTCGGCGTCG GTCCCATCAC TGACGCTACG
CTCGATGAGG TTCATAGCAG GCAACGCCGG GTCGAGTTCG ATAGATGGCT CGAAATGAAC
TATCGAAAGG TCGACGATAA GGGCAACGAT ATTGGTCCGT TCACCACGGC CGAAATAGCG
CGCAGCATGC ATCGAGGTTA TCCAGCTGAT AAAATTCTGA AGGATATGAT GAGGTCAATA
CATCAGTATT TCGAGTTCCC GTCACAGAAT CTGATGGCGG TCGGCCTAGG CGGCGGCCAC
AGCGGCTTTA CCGTTGCCAT CATGCATCTC ATGAATCCCA ACCAGTTAAA GCAGCAGGTT
TACGTGGACA CGCCAAGACC TGAATCGTCG AAGGCCGTCA GCGCTGGGTT CTTTCGTCAA
TCCTGGGCGA CACAGCTAAT TGAGATGCAA AAATTTGTAA AGAATGGTGA CGTGGATCGG
CTTCACTTCG CTGATACTGA CGGCACTATT CCAACGGCGG ATCAGTTGGA AGCGTTGGGC
ATCAGCTTGT TTATCGGGGT CGGCCATGAG ACCACTGGTG CCAACTCCTA TACACAGGCC
GAGATCAAGG AGCTTGTGAC TTGGTTGGAT CGCGATCCGG AAAGCCGTCA CGTGATTTTC
GATGCCACGT CGATGTTGGG TGCTATGCCG TGGGGGGAAG AGTTCGTCCG GCAAGTTGTC
ACAAAGTGCT GCTTGTTCAT GCCATTTCAA AAGGCGATCG GCGGCATCTC GGGCTATTTT
GTTATCTCTC TTACGCCGGA AGCACTGAGG CTCATCGAAA GCAACCAGAA CGATCCTGCT
TGGGCAATAC CCCGGCAGCT CAAGCTTGCA CCTTCTGTCG ATCCAAAAAC GCCTTTAACC
GGCAAGCGGT CTGTGGCCAT CGGACCCTTT TACGACGCAA ATCAGGACAG AATGCTCGGC
GGCGTGATCA ACACGTATAG TGCGTTAGCC TTTGCCGAAA CGACGTTCGG TTTGCTGCAG
GCTGCTCGCC GCGTAGGTTC TGTTAGCGAT TTGAACCGCC GTTCTGTTCA AAATCGGCGA
GTTATTTCGG ACTGGATTAA ACGCTCGTCT CTCCTGAAAT TCACTGTCAC CGAAGCCGAG
CGGCGCGGTG CCGCCGTGAT GCTTTTGAAA GTCGAGGATC CGGATATCTG CGACAAGGAG
GTTCATGCCC GCATCATAGC CCGGTCCAAA CAACTCCTGG GTTATGAAGG CATAACGCAC
GTAAACGGCG ACTTCGAAGA GGGGCTGGAC GCTGCTCGAT ATGTGAATGC TTTTCCCGGC
ATGCCCGGCG ACTACCGCGC TTGGGTAGGT GGCATCCGCG ACCCGGAAGA TCTTCACCTG
CTTCTGGAGA ACCTGGAATA TGCCTACCGC CGAGCCAAGA TATCGGTGCT TGAGGAGGAG
CTGGCCAGTC AAGGCGAAAC CTGCGAACTT AAAGCGGTCG ATAGTGGCCC TCTCCGGAAG
GATGATCCCG ATCGGGCATA CACGGTTCTG GTGTCTGACT TGATTGGACT GCGCCTCGAC
GATCACGGTG CTCCGGATCA CAGCGAAGTG GAGGAACACA TTCAAAGTAA GGGGGGCGTA
TTCCATTGCG GTCCAATTGA AGGAAATCAG GAATTAGAGA AAGGCAAGAT TCATTTCTTC
TATCAGCCAA GCTTGAGTAC GGAGACCGAA CTCCTCGCAT GCACTGCAAA AGGAGAATAT
GATGCGCTTA TTACGGCGGC TACCTTCATC CCTAAACAGT CCTTATTCCC ACTCGGCGGC
GTCCGCATCG GTACAGGAAC CGGGAACATG CTCTCGGATT CTTGGGGTGG CCCGGATGGC
GACGGTGGCA ACGCCCCGCT CATGAATACT CCCGGTATAA ACAGTCGGGC TACAGCCCAA
ATGGCGATGA AGGCGCTCAT TAAGGTTGTT CCTGATCTTC CTGTAAACGA ATTGCATCAG
CGGTCGATTG CAGGAAAGTT CGATACCGGT AGAGATCTGA AGGACTTTCC GACCTCGAAG
CTGGAAGGAC AAAAGTTTAC CGTTCTCGGC TATGGCAACA TTGGACGCGA GGTTGCCAAG
CTTGCAAAGG CTTTTGGAAT GCATGTACGC GTCTATGCAC GAGAGCATCA TAAGGCATGG
ATTGAAGCCG GGGGCTACGA GTATTTTGCC AGTCCGATGG ACGCTGCCTT GGGCGCTAAT
GTTCTTTCAG TGCATGTTGG ACTGGGTAGG CTGAACAAGG CGAGCGGTAA ATTTAGCAAT
GCCGGCCTGA TCAGTTCCGA GTTGTTAGAT GCATTGGCGC ACGGCGCTAT TCTGATCAAC
TTCGACCGAG GCGAGCTTGT CGACGTATGC GCCCTCAAGG AGGCCTTGCA ATCTGGTAAG
GTCCGATATG CTGCAATCGA TGCAGACATT TTCAGTGACG CGGAAAGCGG CGCCCTAAGT
GGGCCGTTAC TACCTTATCT AGCATTGAAT GAGCAGTTCC CCCAAAAACT CGAATTGCTT
CCGCACGTCG CCGCGGATAC CGATCATCCG ACCCGTGTCG CGGGTGCAAA GCAGGCGGTC
GATCAGATCT TTGACGTCAT ACAGTTCAAA GCGGTGAGAA ATGTGAAAGG TTCGCTTCCG
GAAGGATACG TCAATCTCGG AACAAGTTTG CCGACCGGCG TAGGTAGATC AACCCCAGAA
TCGTTTTTGG CATTTGCAGA TCAGTCCGTG ATTCTGAAAG AACTGCGTCG TTTATCTGAG
CGAATTGCAT CCGTGATCGG AGGTATTGAA GCAACGGCTG ACCGAAAACG AAGGGAAGAG
ATCGTCAAAC GATACCATGC AGAACTTATT CGCGACATGC TTCTTCATCG GCGCATTATA
GAGGAAGCCG GGCTCTATGC TCCGGCGACT GCTTCATACT AA
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| Protein sequence | MATTSTLRDQ LDKERNLTRP GPPKAPSNPF FGVGPITDAT LDEVHSRQRR VEFDRWLEMN
YRKVDDKGND IGPFTTAEIA RSMHRGYPAD KILKDMMRSI HQYFEFPSQN LMAVGLGGGH
SGFTVAIMHL MNPNQLKQQV YVDTPRPESS KAVSAGFFRQ SWATQLIEMQ KFVKNGDVDR
LHFADTDGTI PTADQLEALG ISLFIGVGHE TTGANSYTQA EIKELVTWLD RDPESRHVIF
DATSMLGAMP WGEEFVRQVV TKCCLFMPFQ KAIGGISGYF VISLTPEALR LIESNQNDPA
WAIPRQLKLA PSVDPKTPLT GKRSVAIGPF YDANQDRMLG GVINTYSALA FAETTFGLLQ
AARRVGSVSD LNRRSVQNRR VISDWIKRSS LLKFTVTEAE RRGAAVMLLK VEDPDICDKE
VHARIIARSK QLLGYEGITH VNGDFEEGLD AARYVNAFPG MPGDYRAWVG GIRDPEDLHL
LLENLEYAYR RAKISVLEEE LASQGETCEL KAVDSGPLRK DDPDRAYTVL VSDLIGLRLD
DHGAPDHSEV EEHIQSKGGV FHCGPIEGNQ ELEKGKIHFF YQPSLSTETE LLACTAKGEY
DALITAATFI PKQSLFPLGG VRIGTGTGNM LSDSWGGPDG DGGNAPLMNT PGINSRATAQ
MAMKALIKVV PDLPVNELHQ RSIAGKFDTG RDLKDFPTSK LEGQKFTVLG YGNIGREVAK
LAKAFGMHVR VYAREHHKAW IEAGGYEYFA SPMDAALGAN VLSVHVGLGR LNKASGKFSN
AGLISSELLD ALAHGAILIN FDRGELVDVC ALKEALQSGK VRYAAIDADI FSDAESGALS
GPLLPYLALN EQFPQKLELL PHVAADTDHP TRVAGAKQAV DQIFDVIQFK AVRNVKGSLP
EGYVNLGTSL PTGVGRSTPE SFLAFADQSV ILKELRRLSE RIASVIGGIE ATADRKRREE
IVKRYHAELI RDMLLHRRII EEAGLYAPAT ASY
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