| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4242 |
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| Symbol | |
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| ID | 4178650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 139841 |
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| End bp | 141889 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638059143 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_665865 |
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| Protein GI | 110347047 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | [TIGR02767] Ti-type conjugative transfer system protien TraG |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0995866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGTC GACTTTCCTA CAATTCGTTC CGCATTGCCA TCAAGGCATC GATCGCCATC
CTGCCGCTCG ACATCTGGTA TCCCGCCTGG CGTTATGCTT ACGCGCTCTG GGGTGACGCG
CTGATCGGCT GGTACCAGAG CGGCCTGTCA CCAGCATCGG TCACGTACCG GCTTGGCTAC
GCGGCTTGGC CTTCGGTTGC TTTGATCGGT CCCGCCGCGA CTATGACGAT CGCGTTGATG
TTGCGGCGAT CAGGAATGGT GTTGCCGCTC ACGGCGATCG CCGGCGTGTT CGGCATGGCC
GCTGCCACGT TTCTCAGTGT CTGGCCCGAG GCGATACGAT TGCTTTCTTA TAGGCCTGCC
TACGCCTGGT CCGACATTTT GCGCACCGCG GACATGTCCG TCTTCTATGC CGGCGTCGTG
GGCTTTCTCG CGACCATCGC CGGCGTAAGA ATGCTGATGG GCAAGTCGCT GCGCGGCCCG
GGAATAAGAC CGGTTGAGCG CGCCGCCTCG GACATTTTTG GCCACGCCGA CTGGATGGAG
ATCCGCGAAG CGCAAAACCT TTTCTCCAAT GCGAACAGGT CCTCGGATGC AAAAAACCTC
GGGGGTGTCG TCATCGGCGA GGCCTATCGC GTCGATCATG ATGCACCGGC AAGGCGCAGC
CAAAAGTTCG ATCCACATGA TCGCAAGACA TGGGGCAAGG GCGGCAAGGC GCCGTTGCTC
ACCTTTGATC TTTCCTGGGG CGGCACGCAC GGTCTCGTCT TTGCCGGCTC CGGCGCCTAC
AAGACTGTGT CGGTCTGCGT GCCGACTTTG CTTACCTATC GCGGCCCGAT CGTCACCCTC
GATCCGTCAT CGGAGCTGGC GCCGATGCTG ACTGGCGCGC GCACGGGCAT GGGTCGGCGC
GTTATCTCGA TCGATCCGAT GAAGGGGACC GGCAGCTTCA ATGCGCTCGG CTGGCTGGAC
AAGGAGTCGC CGCTGATCGA CGGTGACATC CGCTCCGTCG TCGACTGGAT CTGCGGCGAG
AAGGTTTCCG CAACCCGCGA TGCGCCGCAC GCCACCTCGG GAAAAGCCTT CTTCGAGGGC
CGCGGCAAGG CGATCGTCGA GGCGCTTTTG TCCGACATCG TCTTCGATGG TGAGTTGCCG
GACGACAAGC GCAACCTCGT CACGCTGGCC GAACGGCTTG CCTTTCCGGA AAAGGCGATG
CGGGACGAGC TGGCGCGCAT CCACGAACAT TCGTCTTCGC ACCGTGCCCG CCATCTCGCC
GGCCAGCTGA TGGATCTGGT TGCCGAAACG TTTTCCGGTG TCTACGGCAA TATGAGCGAA
CAGACCGAAT GGCTGGCCAA TCCTGCCTAC GCAAAACTCG TTTCCGGCAA TAGCTTTAAG
ACAGCGGATC TTGTCGCCGG CGATCTCGAT CTTTTCATCA ACTTGCCCAT GAAGGTGCTG
GAATCGACAC CGGCGCTTGC CCGCGTCGTC GTCGGATCGC TGCTCAATGC CGTCTACGAG
GCCGACGGCC GTTTGCCCGG CGGCCGTGTC GTCTTCCTGC TCGATGAAGT CGCCCGCCTC
GGCTACATGA ATTCGCTTGC CAGGGCGCGC GACGCCGGTC GCAAATACGG CATTACGCTG
GTCATGCTCT ACCAGTCCGA GGGCCAATTG AAAGAACAAT GGGGCGACGG CGGCAAAAGC
GCCTGGTTCG AAAGCGCTTC CTGGCGCTCC TATGCCGCGA TCGGCTCGCT CGAACAGGCC
CGTGCCGTCT CCGAGGCGCT CGGCGAGCAT GGTGTCGTCT TGAACAGCGA GACGAAGAAC
CGGGGCAAGA GCGCGAAGCC GCTCGAGATC GGCACCGCCT CGACCGGCGC CTCGGAGCAA
CGTTCGGAGC GCGGCCGGCG TCTGGCAACC GTCTCCGAAA TCCTGGCCGA CGCTCGGGCC
GACGAGCAGT TCGTCTTTGT GCAAGGCAGA AAGCCGCTGC GCTGCGGACG CGCTATCTAT
TTCCGCAGAC CGGAGATGGT CGCAAAGGTC GCAGACAATC GTTTCGCGCC GCATGCGACG
ATTACGTGA
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| Protein sequence | MLGRLSYNSF RIAIKASIAI LPLDIWYPAW RYAYALWGDA LIGWYQSGLS PASVTYRLGY
AAWPSVALIG PAATMTIALM LRRSGMVLPL TAIAGVFGMA AATFLSVWPE AIRLLSYRPA
YAWSDILRTA DMSVFYAGVV GFLATIAGVR MLMGKSLRGP GIRPVERAAS DIFGHADWME
IREAQNLFSN ANRSSDAKNL GGVVIGEAYR VDHDAPARRS QKFDPHDRKT WGKGGKAPLL
TFDLSWGGTH GLVFAGSGAY KTVSVCVPTL LTYRGPIVTL DPSSELAPML TGARTGMGRR
VISIDPMKGT GSFNALGWLD KESPLIDGDI RSVVDWICGE KVSATRDAPH ATSGKAFFEG
RGKAIVEALL SDIVFDGELP DDKRNLVTLA ERLAFPEKAM RDELARIHEH SSSHRARHLA
GQLMDLVAET FSGVYGNMSE QTEWLANPAY AKLVSGNSFK TADLVAGDLD LFINLPMKVL
ESTPALARVV VGSLLNAVYE ADGRLPGGRV VFLLDEVARL GYMNSLARAR DAGRKYGITL
VMLYQSEGQL KEQWGDGGKS AWFESASWRS YAAIGSLEQA RAVSEALGEH GVVLNSETKN
RGKSAKPLEI GTASTGASEQ RSERGRRLAT VSEILADARA DEQFVFVQGR KPLRCGRAIY
FRRPEMVAKV ADNRFAPHAT IT
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