| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4174 |
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| Symbol | |
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| ID | 4178770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 73242 |
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| End bp | 74252 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638059082 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_665805 |
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| Protein GI | 110346987 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.277813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGATT TTATCGGCGA ACTGCTGGAT CGGATCGACG CTTCGGGGCA AAATTTCTCG
CAGCGTGCGT TCGAAGCGCT CGGCCAGGAT ATTGAGCCCC TTCTTCGCCT GCTCTTTGTC
CTCGCCGTTC TCTTCTATGG CGTGCAGCTC TTCCTGGGAA CGTCTCGGCT CAGCGTTGCC
GAAATCATCG GCAGGCTCGC GCGCGTTCTG ATCATCTTCA TCATCGTCAC ATCGTGGGCC
AACTTCAATT CGCTCGTTTA CAAGTGGATC ACGACGGTCC CCGAGGGCGC TGGCCGAGCC
ATCCTCGCAG CGTCAGCAAC CGGTGTCACC GAGCCCTCCA ACGGGCTTTC ACAGATCTGG
AAGACGGCCA ACGTAGCTGC TGCTGCCTTC TCCGAACAGG CGGGGTACCT GTCCGTCCTG
CCTGCTTTGA TCGGGCTGAT TATCATGGTT TTCGCCGGCC TCTTCGTCGC GGTTGCCCTC
GGCATCCTTG TGCTGGCCAA GGTCGTGCTG TGGGTGCTGC TCGGCACGGC GCCGATTTTC
ATTTCCTGCT TCTTCTTCGA CGCGACCCGC AGCTATGCGA TGGGCTGGCT GAACCAGTCG
CTGCTCTACG CACTCATTCC TTTGTTCGTC TACGTCATCG CGGCTTTCCT AATTGCCGCT
ATGGAACCCG AATTGACGAA GATCGACCAG ATCTCCGGCG ATCGAGAACT GAAGCTCAGC
GACTTTGCCG CCTTCATCAT GCTCTGTCTC GCCGGCAGCT TCGTTCTGAT TCAGGTCCAG
TCGCTTGCGC AGGGCATAGC CGGCGGATTG GCCACACCGA TTGGGCCTCG CTCGCGACAG
CTGACTACGA GGGGCATCTT CTGGAGTCGC GAGGCAATCG GCCAATCGGC CAGACAGACG
CAAGCGGCCG TCCACCGGGT GCAGGCACGA CTTCACTCGC CGAGGCAGGA TGGCGCGGCC
GCCTCTATGC AGCGGGCGAT CACGTCAAAC GGAACGCCAA GGCAAACATG A
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| Protein sequence | MDDFIGELLD RIDASGQNFS QRAFEALGQD IEPLLRLLFV LAVLFYGVQL FLGTSRLSVA
EIIGRLARVL IIFIIVTSWA NFNSLVYKWI TTVPEGAGRA ILAASATGVT EPSNGLSQIW
KTANVAAAAF SEQAGYLSVL PALIGLIIMV FAGLFVAVAL GILVLAKVVL WVLLGTAPIF
ISCFFFDATR SYAMGWLNQS LLYALIPLFV YVIAAFLIAA MEPELTKIDQ ISGDRELKLS
DFAAFIMLCL AGSFVLIQVQ SLAQGIAGGL ATPIGPRSRQ LTTRGIFWSR EAIGQSARQT
QAAVHRVQAR LHSPRQDGAA ASMQRAITSN GTPRQT
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