| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4173 |
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| Symbol | |
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| ID | 4178769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 72502 |
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| End bp | 73197 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638059081 |
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| Product | VirB8 |
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| Protein accession | YP_665804 |
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| Protein GI | 110346986 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.717202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA AGTCCGAAAC CGCACTGCGG TCTTATTTCC AGCAGGGCGA TATCTGGGAG
CAGGAAATCA TCAAGCGGGC GAAGCGCTCG GCGCGCGTAG CTTGGTTCTT CTCGATCGTC
TTCGCCGGGA TCGCCCTGCT CAGCCTGCTC GGCGTGGTGT TGATGCTGCC GTTGAAAAGC
TTCGAGCCGT ATATCGTGAC CGTCGACCGG ACGACGGGCT ACATCGAGGT GAAGTCGGGA
CTGACGCGGC CGGCCAACCT CACGGAGCAA CAGGCTGTCA CCCAGGCCAA TGTGGTGCGC
TATATCCGCG CCCGGGAAGG CTACGATCCC TATGCCATCG AGGAGAACTT CGGGATCGCC
GCACTGCTGT CCACAGACGA GGCAGCGCGC GAGTTGCAGG CGCTCTACAG CGCCGCCAAT
GCCCAGAACC CGGCGAAAGT TTACGGGCGC CTGAAACGGG TTCTGGTCGA GATCAAGTCG
GTCACCTTCC CCAATACCAG CACGGCGATC GTGCGATTCT CGACCAACGA ACGCAGCGAC
ACGGAATCGA TCGTGCGTCA TTGGATTTCG GTTGTCCGCT TTCGCTACAC CGACACGCCG
ATGCGCAACG AGTGGCGCTT CGAGAATCCA CTGGGCTTCC AGGTCTACTC GTATCGCCGC
GACCAGGAGA CTGTCACACC CGGGGACGCG CAATGA
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| Protein sequence | MADKSETALR SYFQQGDIWE QEIIKRAKRS ARVAWFFSIV FAGIALLSLL GVVLMLPLKS
FEPYIVTVDR TTGYIEVKSG LTRPANLTEQ QAVTQANVVR YIRAREGYDP YAIEENFGIA
ALLSTDEAAR ELQALYSAAN AQNPAKVYGR LKRVLVEIKS VTFPNTSTAI VRFSTNERSD
TESIVRHWIS VVRFRYTDTP MRNEWRFENP LGFQVYSYRR DQETVTPGDA Q
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