| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4172 |
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| Symbol | |
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| ID | 4178768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 71696 |
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| End bp | 72505 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638059080 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_665803 |
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| Protein GI | 110346985 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.403674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGCC GGTCGTTCAC GGCCGCGCTC GTGCTTCTCG GCTCCCTCTG GCCGGCCCTG
GCAGCGCAGA TGCCTAAGGG CGGCTCGCTC GATGCGCGAG TGACCAGTGT CACCTACCAG
GAGAACAATG TCGTCCAGGT TTTTGCGACC TACGGCATCT CGACCATGAT CATATTCGAC
GAGGACGAGA AGTTCGAAAC GATCTCGCTG GGCGACACCG AAAGCTGGCA GGTCGTCCCC
GCTGAGAAAG GCAACATCCT CTTCGTCAAG CCGATCGCGA AGAATGTGGC AACGAACATG
AACGTCGTCA CCGACAAGCG CATCTATTAC CTCGAGCTGC ACGACTTCGC TCCGGAAGCT
GGCCGCAAGG TTTTCGGAAT CCGCTTCCAC TACCCAGAGA AGAACCTCAA TTCCGCCTTG
CGGAAAGAGG CTGAGCAGCG CGCCGCATGG CCAAACATCT CCGGCATCGA CAAGGCCAAC
GTCAACATCG ACTATTCGTT CTCGGGCGAT GTGCGCCTGA AGCCCCTCAT GGTCTTTGAC
GACGGCAACA AGACCTTCTT CAAGTTCGAT CGTCGCGCGC CGGCGATTTT TGCCGTGAAT
TCCGATTTTT CGGAGACGCT GAGGAACTTC CGCCGGGAAG GTGAGTACAT CGTGGTCGAT
GGAACGGCGA CGCAGTTTAC GCTGCGGGAC GGTGATCAAT GGATTTGCAT CTTCAATCTG
AGAAAGCCGG ATTTCGGGGC TCCGGACCCG GCCATTCTCG GACCGGTTGA GGATGACCAG
GCCAAACGAC GGCGCCGGAG CGGCAACTGA
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| Protein sequence | MRGRSFTAAL VLLGSLWPAL AAQMPKGGSL DARVTSVTYQ ENNVVQVFAT YGISTMIIFD
EDEKFETISL GDTESWQVVP AEKGNILFVK PIAKNVATNM NVVTDKRIYY LELHDFAPEA
GRKVFGIRFH YPEKNLNSAL RKEAEQRAAW PNISGIDKAN VNIDYSFSGD VRLKPLMVFD
DGNKTFFKFD RRAPAIFAVN SDFSETLRNF RREGEYIVVD GTATQFTLRD GDQWICIFNL
RKPDFGAPDP AILGPVEDDQ AKRRRRSGN
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