Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4172 |
Symbol | |
ID | 4178768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 71696 |
End bp | 72505 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638059080 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_665803 |
Protein GI | 110346985 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.403674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGGCC GGTCGTTCAC GGCCGCGCTC GTGCTTCTCG GCTCCCTCTG GCCGGCCCTG GCAGCGCAGA TGCCTAAGGG CGGCTCGCTC GATGCGCGAG TGACCAGTGT CACCTACCAG GAGAACAATG TCGTCCAGGT TTTTGCGACC TACGGCATCT CGACCATGAT CATATTCGAC GAGGACGAGA AGTTCGAAAC GATCTCGCTG GGCGACACCG AAAGCTGGCA GGTCGTCCCC GCTGAGAAAG GCAACATCCT CTTCGTCAAG CCGATCGCGA AGAATGTGGC AACGAACATG AACGTCGTCA CCGACAAGCG CATCTATTAC CTCGAGCTGC ACGACTTCGC TCCGGAAGCT GGCCGCAAGG TTTTCGGAAT CCGCTTCCAC TACCCAGAGA AGAACCTCAA TTCCGCCTTG CGGAAAGAGG CTGAGCAGCG CGCCGCATGG CCAAACATCT CCGGCATCGA CAAGGCCAAC GTCAACATCG ACTATTCGTT CTCGGGCGAT GTGCGCCTGA AGCCCCTCAT GGTCTTTGAC GACGGCAACA AGACCTTCTT CAAGTTCGAT CGTCGCGCGC CGGCGATTTT TGCCGTGAAT TCCGATTTTT CGGAGACGCT GAGGAACTTC CGCCGGGAAG GTGAGTACAT CGTGGTCGAT GGAACGGCGA CGCAGTTTAC GCTGCGGGAC GGTGATCAAT GGATTTGCAT CTTCAATCTG AGAAAGCCGG ATTTCGGGGC TCCGGACCCG GCCATTCTCG GACCGGTTGA GGATGACCAG GCCAAACGAC GGCGCCGGAG CGGCAACTGA
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Protein sequence | MRGRSFTAAL VLLGSLWPAL AAQMPKGGSL DARVTSVTYQ ENNVVQVFAT YGISTMIIFD EDEKFETISL GDTESWQVVP AEKGNILFVK PIAKNVATNM NVVTDKRIYY LELHDFAPEA GRKVFGIRFH YPEKNLNSAL RKEAEQRAAW PNISGIDKAN VNIDYSFSGD VRLKPLMVFD DGNKTFFKFD RRAPAIFAVN SDFSETLRNF RREGEYIVVD GTATQFTLRD GDQWICIFNL RKPDFGAPDP AILGPVEDDQ AKRRRRSGN
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