| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4129 |
|---|
| Symbol | |
|---|
| ID | 4178539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | + |
|---|
| Start bp | 25928 |
|---|
| End bp | 28795 |
|---|
| Gene Length | 2868 bp |
|---|
| Protein Length | 955 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638059038 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_665761 |
|---|
| Protein GI | 110346943 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.594841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG CAGCACGCCG CACCCGCTTT CGGGTTGAAG GCATGGATTG CGCAAGTTGC
GCCGCCAAGA TCGACAAAGC GGTCCGACGA ATACCGGATG TCACAGATGT GAACGTGTCG
GTTGTTGCTG GCACCATGAG CGTTGAACAC GGAGACAAGC TCGATCTCGA CACACTGGCC
CAAAAGGTCA ACCGGCTAGG CTATAAGGCC ACACGCCTTG GTGCGGCGAA GAGGTCGAAG
GCTGCGGAGC GCGCCCACGG CCAAGACCGA AAGTCCGACC ATTCGGACCA TGACGACGAT
CATGCCGATC AAGATCATTC GGACCATGAC CATGCCGGCC ATGTGCACGG GCCCGACGGC
AAGCACGATC ATGCCGACCA TGACCGCGAT CACGCCGGAC ACGATCATTG GGACCATGAC
CATGCCGGCC ATGTGCACGG GCCGGACGGC AAGCACGATC ATGCGGATCA TGACTGCGAT
CACGCCGGAC ACGACCATTC CGGCCATGAC CATGCCGGAC ATGTTCACGG GCCGGATTGC
AAGCACGATC ATGCTGATCG CGATCACGCG GGGCACAGTC ATTCAGGCGA ATATCGCGTC
GCGACTGGTT ACATCGAGGA GACTGCGTCG CCAGGCGCGC ATCAGACCCG CTTTCGCGTC
GCGGGCATGG ATTGCGCGAG CTGTGCGGCA AAGATCGACA CGGCAGTGCG CCGTATGCCG
GATGTCACTG ATGTGAAGGT ATCAGTTGTT GCTGGCACCA TGACCGTCAC GCACGGAAGC
AAGGCTGACC TCGACGGACT TGCCCGCAAG GTCACCAGCC TTGGCTACAA AGCCGCGCCG
ATAGGCCCTG CGGGACAAAA GCCGGCCACC ACCCCCGCAA ACCATGTCCA TGGGCCGGAC
GGTAGGCTTG ACCAGGCACT GACAGCAAGC GGGATCGCTA CCGAGGCGCC TGATGCCCTG
GAAGGCATGC ACGGGCACGA TCACGGGCCG CAGGACGGAC CCTGGTGGAA AACATCTAAA
GCGCAATTGA CGATCATCTG CGGCATCGCG CTGGCCGTCG CTTTTGGGCT TTCGCAGGTT
CTTCCGCAGA CCCAGCCGTG GGGCTTCATC ATTGCAATGG CCGTCGGGCT CATACCAATT
GCGCGACGCG CCTTGCTCGG TGCTGCAAAC GGGAGCCCTT TCACAATCGA GACGTTGATG
ACGGTCGCGG CGGTCGGAGC TGTCATCATC GATGCGGCCG AAGAAGCCGC CGTCGTCGTC
TTCCTGTTTC TTGTCGGTGA ACTCCTTGAA GGGATAGCGA CAGGCCGGGC TCGCGCCTCG
ATACGGGCGC TCGCAACACT GATGCCCAAG ACTGCGCTCC TTGAGCGCGA CGGTGCCACG
CAGACGGTTC CCGCCGAAAG CCTGACGGTA GATGCTGTGG TGCTCGTTCG GCCCGGCGAC
CGTGTGCCCG CCGACGGCAT CGTGCTCTCC GGCGAAAGCG CGGTCGACGA GGCGCCGGTG
ACCGGCGAGT CCGTACCGAA GCGCAAGGAG ACGGGCGACA ATGTCTTCGC CGGCACTGTG
AATCAGGAAG GCGTGCTCAG GGTGCGTGTA ACGGCAGCAG CGGCCGACAA CACCATTTCC
CGTATCATCG CATTGGTCGA GGAGGCCCAA GAGTCCAAGG CGCCGACCGA ACGCTTTATC
GATCGCTTCT CGAAATATTA TACCCCGGGC GTAATGGTGG TGGCTGCACT GATAGCGATC
TTGCCGCCGC TGCTTGCCGG CGCGGAATGG AACACCTGGA TCTATCGTGG CCTCGCAGTT
CTTCTGATCG GATGCCCCTG CGCGCTGGTC ATCTCCACGC CTGCGGCAAT CGCCGCGGCG
CTATCCGCCG GCGCGCGCCG TGGTCTCCTG ATGAAGGGCG GAGCGGTGCT GGAGAATCTG
GGCAAAGTCA ACTACGTCGC GCTAGACAAA ACCGGGACGC TTACCGAAGG CAAGCCGAAG
GTCACCGACA TCATCGGTGT GGCACGCGAC GGGCGCGAGG TATTGAGGCT CGCAGCGGCC
CTTGAGGCCG GATCGAGCCA TCCGCTGGCT GTGGCCATCC TGGCAAGGGC GGAGGCTGAC
AAGGTTCCTG TCGTCGCCGC CACCGATGCC GGCGCTGTTG GCGGCAAGGG TGTGGTAGGG
ACAGTGGATG CGGTGAAGCT CTTTCTGGCT TCACCGCGCG CCGCGGCCGA AAAGGTCAAA
TTGGACCAAG GGCTGCTATC GCAAATCGCC GCGCTGAACG ACGAAGGCAA GACTGTTTCG
GTGCTGCTTG CCGGAACGGA AGTGGCGGGC CTCTTCGCAA TACGCGACGA ACCGCGAGAG
GACGCCAAGA CCGGTATAGC CGCGCTACAC GATCTTGGAG CCGAAACCGT CATGCTGACG
GGCGACAATG AGCGGACGGC GAAAGCCATA GCCTCGTCGC TCGACATGGA AGCACGCGCA
GAACTGATGC CGCAGGATAA ACAGAAGATC GTCGGCGAGA TGCGCGCGAA GGGCAAGTTC
GTGGCCAAGG TCGGTGACGG GATCAATGAC GCTCCGGCGC TCGCAGCTGC TGACATCGGC
ATTGCCATGG GCAGCGGCAC GGACGTTGCT CTGGAAACAG CCGATGCGGC GGTCTTGCAT
GGCCGTGTCA AGGACATCGC CAATATGGTG GTGTTGTCGC GCCTCACCAT GCGCAACATC
CTCCAGAATA TCACCCTCTC GCTTGGCCTG AAGGCCGTAT TCCTCGTAAC CACGGTTCTC
GGCGTGACCG GGCTGTGGCC CGCCATTCTT GCCGATACCG GCGCGACGGT ATTGGTCACC
GCCAATGCCA TGCGCCTGCT CGCCTGGAAG GGGCTTCGTG AAACATGA
|
|---|
| Protein sequence | MTAAARRTRF RVEGMDCASC AAKIDKAVRR IPDVTDVNVS VVAGTMSVEH GDKLDLDTLA
QKVNRLGYKA TRLGAAKRSK AAERAHGQDR KSDHSDHDDD HADQDHSDHD HAGHVHGPDG
KHDHADHDRD HAGHDHWDHD HAGHVHGPDG KHDHADHDCD HAGHDHSGHD HAGHVHGPDC
KHDHADRDHA GHSHSGEYRV ATGYIEETAS PGAHQTRFRV AGMDCASCAA KIDTAVRRMP
DVTDVKVSVV AGTMTVTHGS KADLDGLARK VTSLGYKAAP IGPAGQKPAT TPANHVHGPD
GRLDQALTAS GIATEAPDAL EGMHGHDHGP QDGPWWKTSK AQLTIICGIA LAVAFGLSQV
LPQTQPWGFI IAMAVGLIPI ARRALLGAAN GSPFTIETLM TVAAVGAVII DAAEEAAVVV
FLFLVGELLE GIATGRARAS IRALATLMPK TALLERDGAT QTVPAESLTV DAVVLVRPGD
RVPADGIVLS GESAVDEAPV TGESVPKRKE TGDNVFAGTV NQEGVLRVRV TAAAADNTIS
RIIALVEEAQ ESKAPTERFI DRFSKYYTPG VMVVAALIAI LPPLLAGAEW NTWIYRGLAV
LLIGCPCALV ISTPAAIAAA LSAGARRGLL MKGGAVLENL GKVNYVALDK TGTLTEGKPK
VTDIIGVARD GREVLRLAAA LEAGSSHPLA VAILARAEAD KVPVVAATDA GAVGGKGVVG
TVDAVKLFLA SPRAAAEKVK LDQGLLSQIA ALNDEGKTVS VLLAGTEVAG LFAIRDEPRE
DAKTGIAALH DLGAETVMLT GDNERTAKAI ASSLDMEARA ELMPQDKQKI VGEMRAKGKF
VAKVGDGIND APALAAADIG IAMGSGTDVA LETADAAVLH GRVKDIANMV VLSRLTMRNI
LQNITLSLGL KAVFLVTTVL GVTGLWPAIL ADTGATVLVT ANAMRLLAWK GLRET
|
|---|
| |