Gene Meso_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4117 
Symbol 
ID4178527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008242 
Strand- 
Start bp12101 
End bp12757 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID638059026 
Producttransglutaminase-like cysteine peptidase, BTLCP 
Protein accessionYP_665749 
Protein GI110346931 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCT TTATTGTCTG CGCCCTGGCG CTCGGGATGT CCTGCGTCGT AGCTTCGGCC 
AACGCCTTTC ACTTCAACCC GACCCAACCC ACCAATGCGC GCAATATGCT CACGTACGGC 
GCGACAACCA TGCCGGTGGG ATACTACGAA TATTGCCGTC GCTACCGAAA GGAGTGCGCG 
CGCGGACCAG AGGGGATGAT GATCAAGCTT ACCGAGCCTC GGTGGCGCGA AATCGTCTCG 
GTCAACGCTG ACGTCAATGC CGCGGTTGCG CCGTTGACCG ATATGGAGAT TTTCGGAGTC 
GAGGAGCGAT GGGAGTACCC GACGACAGTG GGGGACTGCG AGGACTACGC CCTTGAGAAA 
CGCAAGCGCC TGAACGAGAT GGGCTATCCC TTGGGAGCCC TCTTGTTGAC GGTCGCCCGT 
GATGCCAAGG GCGGTGGGCA CGCCGTGCTG ACGTTAGTCA CGGACCTCGG CGACTTCATC 
CTGGACAATC TGGAGCAGAA GGTCCTCCTG TGGAAGGACA CGGAAATCTA CTATCTGAAG 
CGTCAGTCAG GAGATGACCT GAATCGCTGG GTCAGCCTGG TGAATGAGGA AGACCTTCTA 
ATCTCGTCGG GCAGGAGCCA AGCGCCTTCC ACAGCGGCGG CGAGCGTCAA AAGATAG
 
Protein sequence
MIRFIVCALA LGMSCVVASA NAFHFNPTQP TNARNMLTYG ATTMPVGYYE YCRRYRKECA 
RGPEGMMIKL TEPRWREIVS VNADVNAAVA PLTDMEIFGV EERWEYPTTV GDCEDYALEK 
RKRLNEMGYP LGALLLTVAR DAKGGGHAVL TLVTDLGDFI LDNLEQKVLL WKDTEIYYLK 
RQSGDDLNRW VSLVNEEDLL ISSGRSQAPS TAAASVKR