Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_R0080 |
Symbol | |
ID | 4175800 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4833482 |
End bp | 4836366 |
Gene Length | 2885 bp |
Protein Length | |
Translation table | |
GC content | 51% |
IMG OID | 640716068 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.357348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGTTAAGTGA CTAAGCGTAT ACGGTGGATG CCTAGGCAGT TAGAGGCGAT GAAGGACGTG TAAGTCTGCG AAAAGTTGTG GGGAGCCGAC AAAATGCTTT GATCCACAAA TGTCCGAATG GGGAAACCCA CCGCTTCGGC GGTATCATAC AGTGAATACA TAGCTGTATG AGGCAAACGA GGGGAACTGA AACATCTAAG TACCCTTAGG AAAAGAAATC AACCGAGATT CCCCTAGTAG CGGCGAGCGA ACGGGGATTA GCCCTTAAGC TAATGATAAG CGAGTGGAAG GTGTTGGAAA GCACAGCGAT ACAAGGTGAT AGCCCTGTAC ACGAACGCGA ATTTTAAGTG AAATCGAGTA GGTCGGGACA CGTGTTATCT TGACTGAACA TGGGGGGACC ATCCTCCAAG GCTAAATACT CCTAACTGAC CGATAGTGAA CTAGTACCGT GAGGGAAAGG CGAAAAGAAC CCCTGTGAGG GGAGTGAAAT AGAACCTGAA ACCGTATACG TACAAGCAGT GGGAGCAGAC TTGTTCTGTG ACTGCGTACC TTTTGTATAA TGGGTCAGCG ACTTATATTT TGTAGCAAGG TTAACCGAAT AGGGGAGCCG TAGCGAAAGC GAGTGTTAAC TGCGCGTTTT AGTTGCAAGG TATAGACCCG AAACCCGGTG ATCTAGCCAT GGGCAGGTTG AAGGTTGAGT AACATCAACT GGAGGACCGA ACCGACTAAC GTTGAAAAGT TAGCGGATGA CTTGTGGCTG GGGGTGAAAG GCCAATCAAA CCGGGAGATA GCTGGTTCTC CCCGAAAGCT ATTTAGGTAG CGCCTCGGAC GAATACCACT GGGGGTAGAG CACTGTTAAG GCTAGGGGGT CATCCCGACT TACCAACCCT TTGCAAACTC CGAATACCAG TGAGTACTAT CCGGGAGACA CACGGCGGGT GCTAACGTCC GTCGTGAAGA GGGAAACAAC CCAGACCGCC AGCTAAGGTC CCAAAATTAT TGCTAAGTGG GAAACGATGT GGGAAGGCTA AGACAGCTAG GAGGTTGGCT TAGAAGCAGC CACCCTTTAA AGAAAGCGTA ATAGCTCACT AGTCGAGTCG GCCTGCGCGG AAGATGTAAC GGGGCTAAGC AATATACCGA AGCTGCGGAC GCAAAGTTTA CTTTGCGTGG TAGGGGAGCG TTGTGTAAGT GGCTGAAGGT GAACTGAGAG GTTTGCTGGA CATATCACAA GTGCGAATGC TGACATGAGT AACGATAATG CGGGTGAAAA ACCCGCACGC CGGAAGACCA AGGTTTCCTG TCCCATGCTA ATCAGGGCAG GGTAAGTCGG CCCCTAAGGC GAGGCAGAAA TGCGTAGTCG ATGGGAAACG GATTAATATT TCCGTACTTG GTATATCAGT GATGGGGGGA CGGAGAAGGT TATGCAAGCA TAGCGTTGGT TGTCTATGTG AAAGTGTGTA GGGTTGAATC TTAGGTAAAT CCGGGATTCT ACATGCCTGA GACACGAGAC GAGATTCTAC GGAATTGAAG TTGCAAATAC CCTGCTTCCA GGAAAAGCCT CTAAACTTAT GATATATCGA ACCGTACCCC AAACCGACAC AGGTGGTCAG GTAGAGAATA CTAAGGCGCT TGAGAGAACT CGGGTGAAGG AACTCGGCAA AATCGTACCG TAACTTCGGG AGAAGGTACG CCCCTGTTTG TGATGAGACT TGCTCTTTGA GCGAATGGGG GCCGCAGTGA AAAGGTGGCT GGGACTGTTT ATTAAAAACA CAGCACTGTG CTAAATCGAA AGATGACGTA TACGGTGTGA CACCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTTAGCG CAAGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGTGTAAC CATGGCCACG CTGTCTCCAC CCGAGACTCA GTGAAATTGA AATCGCAGTG AAGATGCTGT GTACCCGCAC CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTGGC ACTGAACATT GACCCTACAT GTGTAGGATA GGTGGGAGAC TTTGAAGCGT GAACGCCAGT TTGCGTGGAG TCAACCTTGA AATACCACCC TTGTACGTTT GATGTTCTAA CGTTGTTCCC TTATCGGGAA TGCGGACAGT GCCTGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGCACGAAG GTTGGCTAAT CCTGGTCGGA CATCAGGAGG TTAGTGCAAT GGCATAAGCC AGCTTAACTG CGAGACAGAC ACGTCGAGCA GGTACGAAAG TAGGTCATAG TGATCCGGTG GTTCTGTATG GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG AAGTCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA ACGTCGTGAG ACAGTTCGGT CCCTATCTGG TGTGGGCGTT GGATGATTGA GGGGAGCTGC TCCTAGTACG AGAGGACCGG AGTGGACGAA CCGCTGGTGT TCGGGTTGTT TTGCCAAAAG CATTGCCCGG TAGCTACGTT CGGAATCGAT AACCGCTGAA AGCATCTAAG CGGGAAGCGA GCCCCAAGAT GAGTCATCCC TGGCAGTTTA ACTGTCCTAA AGGGTTGTTG AAGACTACGA CGTTGATAGG CAGGATGTGG AAGCGTTGCA AGGCGTTAAG CTAACCTGTA CTAATTGCCC GTGAGGCTTA ACCAT
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Protein sequence | |
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