Gene Patl_R0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_R0019 
Symbol 
ID4173294 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1204478 
End bp1207362 
Gene Length2885 bp 
Protein Length 
Translation table 
GC content51% 
IMG OID640716007 
Product23S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGTTAAGTGA CTAAGCGTAT ACGGTGGATG CCTAGGCAGT TAGAGGCGAT GAAGGACGTG 
TAAGTCTGCG AAAAGTTGTG GGGAGCCGAC AAAATGCTTT GATCCACAAA TGTCCGAATG
GGGAAACCCA CCGCTTCGGC GGTATCATAC AGTGAATACA TAGCTGTATG AGGCAAACGA
GGGGAACTGA AACATCTAAG TACCCTTAGG AAAAGAAATC AACCGAGATT CCCCTAGTAG
CGGCGAGCGA ACGGGGATTA GCCCTTAAGC TAATGATAAG CGAGTGGAAG GTGTTGGAAA
GCACAGCGAT ACAAGGTGAT AGCCCTGTAC ACGAACGCGA ATTTTAAGTG AAATCGAGTA
GGTCGGGACA CGTGTTATCT TGACTGAACA TGGGGGGACC ATCCTCCAAG GCTAAATACT
CCTAACTGAC CGATAGTGAA CTAGTACCGT GAGGGAAAGG CGAAAAGAAC CCCTGTGAGG
GGAGTGAAAT AGAACCTGAA ACCGTATACG TACAAGCAGT GGGAGCAGAC TTGTTCTGTG
ACTGCGTACC TTTTGTATAA TGGGTCAGCG ACTTATATTT TGTAGCAAGG TTAACCGAAT
AGGGGAGCCG TAGCGAAAGC GAGTGTTAAC TGCGCGTTTT AGTTGCAAGG TATAGACCCG
AAACCCGGTG ATCTAGCCAT GGGCAGGTTG AAGGTTGAGT AACATCAACT GGAGGACCGA
ACCGACTAAC GTTGAAAAGT TAGCGGATGA CTTGTGGCTG GGGGTGAAAG GCCAATCAAA
CCGGGAGATA GCTGGTTCTC CCCGAAAGCT ATTTAGGTAG CGCCTCGGAC GAATACCACT
GGGGGTAGAG CACTGTTAAG GCTAGGGGGT CATCCCGACT TACCAACCCT TTGCAAACTC
CGAATACCAG TGAGTACTAT CCGGGAGACA CACGGCGGGT GCTAACGTCC GTCGTGAAGA
GGGAAACAAC CCAGACCGCC AGCTAAGGTC CCAAAATTAT TGCTAAGTGG GAAACGATGT
GGGAAGGCTA AGACAGCTAG GAGGTTGGCT TAGAAGCAGC CACCCTTTAA AGAAAGCGTA
ATAGCTCACT AGTCGAGTCG GCCTGCGCGG AAGATGTAAC GGGGCTAAGC AATATACCGA
AGCTGCGGAC GCAAAGTTTA CTTTGCGTGG TAGGGGAGCG TTGTGTAAGT GGCTGAAGGT
GAACTGAGAG GTTTGCTGGA CATATCACAA GTGCGAATGC TGACATGAGT AACGATAATG
CGGGTGAAAA ACCCGCACGC CGGAAGACCA AGGTTTCCTG TCCCATGCTA ATCAGGGCAG
GGTAAGTCGG CCCCTAAGGC GAGGCAGAAA TGCGTAGTCG ATGGGAAACG GATTAATATT
TCCGTACTTG GTATATCAGT GATGGGGGGA CGGAGAAGGT TATGCAAGCA TAGCGTTGGT
TGTCTATGTG AAAGTGTGTA GGGTTGAATC TTAGGTAAAT CCGGGATTCT ACATGCCTGA
GACACGAGAC GAGATTCTAC GGAATTGAAG TTGCAAATAC CCTGCTTCCA GGAAAAGCCT
CTAAACTTAT GATATATCGA ACCGTACCCC AAACCGACAC AGGTGGTCAG GTAGAGAATA
CTAAGGCGCT TGAGAGAACT CGGGTGAAGG AACTCGGCAA AATCGTACCG TAACTTCGGG
AGAAGGTACG CCCCTGTTTG TGATGAGACT TGCTCTTTGA GCGAATGGGG GCCGCAGTGA
AAAGGTGGCT GGGACTGTTT ATTAAAAACA CAGCACTGTG CTAAATCGAA AGATGACGTA
TACGGTGTGA CACCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTTAGCG CAAGCGAAGC
TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG GTAGCGAAAT
TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGTGTAAC CATGGCCACG CTGTCTCCAC
CCGAGACTCA GTGAAATTGA AATCGCAGTG AAGATGCTGT GTACCCGCAC CTAGACGGAA
AGACCCCGTG AACCTTTACT ATAGCTTGGC ACTGAACATT GACCCTACAT GTGTAGGATA
GGTGGGAGAC TTTGAAGCGT GAACGCCAGT TTGCGTGGAG TCAACCTTGA AATACCACCC
TTGTACGTTT GATGTTCTAA CGTTGTTCCC TTATCGGGAA TGCGGACAGT GCCTGGTGGG
TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGCACGAAG GTTGGCTAAT
CCTGGTCGGA CATCAGGAGG TTAGTGCAAT GGCATAAGCC AGCTTAACTG CGAGACAGAC
ACGTCGAGCA GGTACGAAAG TAGGTCATAG TGATCCGGTG GTTCTGTATG GAAGGGCCAT
CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA GAGTTCATAT
CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG AAGTCGGTCC
CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA ACGTCGTGAG
ACAGTTCGGT CCCTATCTGG TGTGGGCGTT GGATGATTGA GGGGAGCTGC TCCTAGTACG
AGAGGACCGG AGTGGACGAA CCGCTGGTGT TCGGGTTGTT TTGCCAAAAG CATTGCCCGG
TAGCTACGTT CGGAATCGAT AACCGCTGAA AGCATCTAAG CGGGAAGCGA GCCCCAAGAT
GAGTCATCCC TGGCAGTTTA ACTGTCCTAA AGGGTTGTTG AAGACTACGA CGTTGATAGG
CAGGATGTGG AAGCGTTGCA AGGCGTTAAG CTAACCTGTA CTAATTGCCC GTGAGGCTTA
ACCAT
 
Protein sequence