Gene Patl_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4311 
Symbol 
ID4176101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp5183536 
End bp5184018 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content42% 
IMG OID638057348 
Productputative nucleotide-binding protein 
Protein accessionYP_663864 
Protein GI109900609 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.57751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCAT TTGATATTGT GTCAGAAATT AAATTAGAAG AAGTGAGAAA CGCCGTCGAA 
AACGCTAACC GCGAGCTTTC CACCCGTTTT GACTTTCGTG GCGTAGAAGC CAGTTTCGAG
CTTAAAGAAA ACATCGTTAC TATGTCTTGT GATAGTGATT TTCAGTTAAA ACAAATGCTC
GATATCTTGC GCGGCACTTG TGTAAAACGC GGCGTAGATA CAGCAGCCTT TGAAGAAAAA
GACGTTCAGC ACATAGGTAA GATATACAAA CAGGCTATCG CGTTTAAAGA AGGCATTGAA
CAGCCTGTGG CCAAAAAGCT GATCAAGATG ATAAAAGACG CCAAGATTAA AGTGCAAGCT
TCGATACAGG GCGATCAAGT GCGTGTCACG GGTAAAAAAC GTGATGATTT ACAGCAAGTC
ATGGCGTTAG CGAAAAGCAG TGACCTAGAG CAACCCTTAC AATTTACCAA TTTTCGAGAT
TAG
 
Protein sequence
MPSFDIVSEI KLEEVRNAVE NANRELSTRF DFRGVEASFE LKENIVTMSC DSDFQLKQML 
DILRGTCVKR GVDTAAFEEK DVQHIGKIYK QAIAFKEGIE QPVAKKLIKM IKDAKIKVQA
SIQGDQVRVT GKKRDDLQQV MALAKSSDLE QPLQFTNFRD