| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4305 |
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| Symbol | |
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| ID | 4176095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5176319 |
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| End bp | 5176957 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638057342 |
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| Product | methyltransferase GidB |
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| Protein accession | YP_663858 |
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| Protein GI | 109900603 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.412707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGATA ACACAGAGTA CTTAACAGGT TTACTTAGTA CACATATCAA GCGCACTGAT
CTACAGGTAA CAAAAGATCA GATCAGCCAG TTAGTTGGTT TTGTGCAAAT GATCGATAAA
TGGAATAAAA CCTACAACCT AACGTCAGTA CGAGACGTTG AGTCTATGTT GTTAAAACAC
ATCATGGACT CCATCGTTGT TGCGCAGCAT CTATCTCAAA GCCACTACAT TGATGTGGGA
ACAGGCCCTG GTTTACCAGG GATACCACTT GCTATCATGT TACCCGAAAC GCATTTTACC
TTGCTTGATA GCCTGGGGAA GCGTGTTAGA TTCATGAAGC AAGTTGCTTA TGAGTTGAAA
CTCGATAATA TTCAACCTGT TCAATCTAGA GTAGAAGATT ATGTCAGCCC TCATCAGCTC
AATGGTGTTT TAAGCCGAGC GTTCGCGTCA CTAAATGACA TGTTGAACTG GTGCCAGCAC
TTGATTGGAA ACGATGGAAC TTTCATCGCA CTTAAAGGGC AATTACCTCA ACAAGAAATA
GACGATTTGC CTGCGGGCTT TGCCGTCACT GAGATTGTTC AGTTGCAGGT ACCTGAATTG
GATGGCGATA GGCATCTGAT AAAGATTGTT AAGTCATAA
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| Protein sequence | MSDNTEYLTG LLSTHIKRTD LQVTKDQISQ LVGFVQMIDK WNKTYNLTSV RDVESMLLKH
IMDSIVVAQH LSQSHYIDVG TGPGLPGIPL AIMLPETHFT LLDSLGKRVR FMKQVAYELK
LDNIQPVQSR VEDYVSPHQL NGVLSRAFAS LNDMLNWCQH LIGNDGTFIA LKGQLPQQEI
DDLPAGFAVT EIVQLQVPEL DGDRHLIKIV KS
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