Gene Patl_4299 details

Gene Information

• Locus tag: Patl_4299
• ID: 4176089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 5172352
• End bp: 5172822
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638057336
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_663852
• Protein GI: 109900597
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0127167
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATATCA ATGCCACTCT ATTTGGCGAA CTTCTAGCAT TTATATTCTT CGTGTGGTTC 
TGCATGAAGT TTGTATGGCC CCCAATTATG GGCGCGATTG AAGAACGCCA AAAGAAAATT 
GCTGATGGTC TTGCTGCGTC TGAACGCGGT GAAAAAGATC TAGAACTAGC TCAAGCGAAA 
GCAACAGAGC AGTTGAAAGA GGCGAAAACT CAAGCAGCTG GAATTATCGA GCAGGCTAAA 
AAGCGTGGTT CTCAAATAGT TGATGAAGAA ACGCAACGTG CCCACCAAGA GCGTGAGAAT 
ATCATTGCTC AAGGTCATGC TGAAATCGAA GCTGAGCGTA ACCGTGCAAA AGAAGATTTG 
CGTAAGCAAG TCGCAGCGTT AGCTGTTGCC GGTGCTGAGA GAATTCTTGA GCGTCAAATT 
GATGCTGCAG CGCAAAGTGA CATAGTTGAA AAACTTGTCG CCGAGCTATA A 

 

Protein sequence

MNINATLFGE LLAFIFFVWF CMKFVWPPIM GAIEERQKKI ADGLAASERG EKDLELAQAK 
ATEQLKEAKT QAAGIIEQAK KRGSQIVDEE TQRAHQEREN IIAQGHAEIE AERNRAKEDL 
RKQVAALAVA GAERILERQI DAAAQSDIVE KLVAEL