| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4297 |
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| Symbol | |
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| ID | 4176087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5170249 |
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| End bp | 5171790 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057334 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_663850 |
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| Protein GI | 109900595 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0474794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATTGCAGAA CTGATCAAAC AGCGAATTGA ACAGTTTGAA
GTAGTAAGTG AAGCTCGTAA CGAAGGAACT ATCGTTGGTG TAACCGACGG TATTATCCGT
ATTCATGGCC TTGCAGATGT AATGCAAGGT GAGATGATTG AGCTTCCTGG TAATCGCTAC
GCTATCGCAT TGAACCTAGA GCGCGACTCT GTAGGTGCGG TTGTTATGGG TCCTTACGCT
GACCTTCAAG AAGGCGCAAA GGTGACTTCA TCAGGCCGTA TCCTTGAAGT ACCAGTGGGT
CGTGGTTTGC TAGGTCGTGT TGTAAACACA CTTGGTGCTC CGATCGATGG TAAAGGCGCA
ATCGAAGCTG ATGGTTTTGA ACCTGTAGAA AAAATTGCCC CTGGCGTTAT TGAACGTCAA
TCGGTAGATC AACCAATCCA AACTGGTTAT AAATCAGTTG ATGCCATGAT CCCAGTAGGT
CGTGGACAAC GTGAATTGGT TATCGGTGAC CGTCAAACAG GTAAAACTGC TTTGGCCATC
GATGCGATCA TCAACCAGAA AGATTCTGGC GTTAAATGTG TTTACGTAGC GGTTGGCCAA
AAGGCATCAA CTATCGCTAA CGTAGTACGT AAGCTTGAAG AGCACGGCGC AATGGCTCAT
ACCATTGTTG TTGCAGCATC AGCTTCTGAA TCAGCAGCAT TGCAATACCT TGCTCCTTAT
TCTGGTTGTA CTATGGGTGA ATACTTCCGT GACCGCGGTG AAGATGCGTT AATCGTATAC
GATGACCTAT CTAAACAAGC TGTTGCGTAT CGTCAAATTT CACTATTACT ACGTCGTCCG
CCGGGTCGTG AAGCATATCC TGGTGACGTT TTCTATTTGC ACTCGCGTCT TCTAGAGCGT
GCTGCACGTG TTAACGAAAA CTACGTAGAG AATTTCACCA AGGGTGAAGT AAAAGGTAAA
ACAGGCTCTT TGACTGCATT ACCGATTATC GAAACTCAAG CAGGTGATGT ATCAGCATTC
GTACCTACTA ACGTAATCTC AATTACCGAT GGTCAGATTT TCTTAGAAAC TGACTTGTTT
AACTCAGGTA TTCGTCCTGC GGTTAACGCC GGTATTTCAG TATCACGTGT TGGTGGTGCA
GCCCAGACTA AAATCGTTAA GAAGTTAGGT GGTGGTATCC GTCTAGCACT TGCTCAGTAC
CGTGAATTGG CAGCTTTCTC TCAATTCGCA TCTGACCTTG ACGAAGCGAC TCGTGCTCAA
TTAGAGCATG GTGAGCGTGT TATGGAATTA ATGAAACAGA ACCAATATGC ACCGCTTTCA
GTGGCTGATA TGTCTGTTTC ATTGTTCGCT GTTGAAAAAG GTTACTTGAA AGACGTTGAG
CTAGACAAAA TCTTAGATTT TGAAGCTGCG TTGCACTCGT ACATGAACAG CGAATACGCA
GAGCTGATAA AAACTATCAA TGATACAGGT AATTTCAACG GTGAAATTGA AGCCACGTTA
GCTGAAGCTT TAGAGAAATT TAAAGCGACA CAAACTTGGT AA
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| Protein sequence | MQLNSTEIAE LIKQRIEQFE VVSEARNEGT IVGVTDGIIR IHGLADVMQG EMIELPGNRY
AIALNLERDS VGAVVMGPYA DLQEGAKVTS SGRILEVPVG RGLLGRVVNT LGAPIDGKGA
IEADGFEPVE KIAPGVIERQ SVDQPIQTGY KSVDAMIPVG RGQRELVIGD RQTGKTALAI
DAIINQKDSG VKCVYVAVGQ KASTIANVVR KLEEHGAMAH TIVVAASASE SAALQYLAPY
SGCTMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVNENYVE NFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGIRPAVNA GISVSRVGGA AQTKIVKKLG GGIRLALAQY RELAAFSQFA SDLDEATRAQ
LEHGERVMEL MKQNQYAPLS VADMSVSLFA VEKGYLKDVE LDKILDFEAA LHSYMNSEYA
ELIKTINDTG NFNGEIEATL AEALEKFKAT QTW
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