| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4295 |
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| Symbol | |
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| ID | 4176085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5167916 |
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| End bp | 5169301 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057332 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_663848 |
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| Protein GI | 109900593 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.797845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG GTAAGGTCGT CCAAATCATT GGCGCCGTTG TGGATATTGA ATTTCCACAA
GATTCGGTTC CAAAAATATA TGACGCATTG CGTATCACCG AAGGTGATCT GCAAGGTTTG
ACCCTAGAAG TGCAGCAACA ACTTGGTGGT GGCGTAGTGC GTACAATCGC ATTGGGTACG
ACTGATGGCT TGCGCCGTGG TTTGACAGTA GACAATACTG GTGAAGCCAT TCAGGTTCCA
GTTGGTAAGG CTACTCTTGG TCGTATCATG GATGTATTGG GTAACCCAAT CGACGAAGCA
GGCCCTATTG GTGAAGAAGA GCGTATGTCT ATTCACCGTG AAGCGCCTAC TTATGAAGAT
CAATCAAGTT CAATTGAACT ACTTGAAACA GGCATCAAAG TTATCGACTT GGTATGTCCG
TTCGCTAAGG GTGGTAAAGT TGGTTTATTC GGTGGTGCCG GTGTTGGTAA AACCGTAAAC
ATGATGGAGC TTATCCGTAA CATCGCTATC GAGCACAGTG GTTACTCTGT ATTCGCTGGT
GTTGGTGAGC GTACTCGTGA AGGTAACGAT TTCTATCATG AAATGAACGA ATCTAACGTA
CTTGATAAAG TATCGTTGGT TTACGGTCAA ATGAACGAGC CTCCTGGAAA CCGTTTACGC
GTGGCGTTGA CAGGTTTAAC CATGGCTGAG AAATTCCGTG ACGAAGGTCG TGACGTACTT
TTCTTCGTAG ATAACATCTA CCGTTATACG CTTGCTGGTA CTGAAGTATC TGCATTGCTA
GGTCGTATGC CATCTGCGGT AGGTTATCAG CCTACATTGG CTGAAGAGAT GGGTGTGCTT
CAAGAGCGTA TCGCATCAAC TAAGACGGGC TCAATCACGT CTATCCAAGC GGTATACGTA
CCGGCGGATG ATTTGACCGA TCCATCACCT GCAACTACCT TCGCTCACTT AGATGCGACG
GTTGTATTGT CACGTGATAT CGCCTCTCTT GGTATCTACC CTGCTGTTGA TCCACTTGAT
TCAACTTCAC GTCAGCTTGA CCCACTTGTT ATTGGTCAAG AGCATTATGA TACTGCACGT
GGTGTTCAAT CGGTTCTTCA ACGCTATAAA GAGCTTAAAG ACATCATTGC TATTTTGGGC
ATGGACGAGT TATCTGAAGA AGATAAATTG TCTGTATCAC GTGCTCGTAA AATTCAGCGC
TTCTTGTCTC AGCCTTTCTT CGTTGCTGAA GTATTCACCG GTTCACCTGG TAAATACGTA
TCATTGAAAG ATACGATCAG CGGCTTTAAA GGCATTCTTG AAGGCGAATT TGACGACCTT
CCTGAACAAG CTTTCTACAT GGTTGGTTCA ATCGAAGAAG CATCTGAGAA AGCCAAAAAA
ATGTAA
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| Protein sequence | MSQGKVVQII GAVVDIEFPQ DSVPKIYDAL RITEGDLQGL TLEVQQQLGG GVVRTIALGT
TDGLRRGLTV DNTGEAIQVP VGKATLGRIM DVLGNPIDEA GPIGEEERMS IHREAPTYED
QSSSIELLET GIKVIDLVCP FAKGGKVGLF GGAGVGKTVN MMELIRNIAI EHSGYSVFAG
VGERTREGND FYHEMNESNV LDKVSLVYGQ MNEPPGNRLR VALTGLTMAE KFRDEGRDVL
FFVDNIYRYT LAGTEVSALL GRMPSAVGYQ PTLAEEMGVL QERIASTKTG SITSIQAVYV
PADDLTDPSP ATTFAHLDAT VVLSRDIASL GIYPAVDPLD STSRQLDPLV IGQEHYDTAR
GVQSVLQRYK ELKDIIAILG MDELSEEDKL SVSRARKIQR FLSQPFFVAE VFTGSPGKYV
SLKDTISGFK GILEGEFDDL PEQAFYMVGS IEEASEKAKK M
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