Gene Patl_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4292 
Symbol 
ID4176082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5163529 
End bp5164119 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content44% 
IMG OID638057329 
ProductDTW domain-containing protein 
Protein accessionYP_663845 
Protein GI109900590 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.616546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGAG CCATTTGTCG TCGTTGTGAT TACCCTCTGT CCGTATGTAT CTGCGATTTA 
TTATGCGAGG TTATTAGTTC ACAGCGAATT ATCATCCTGC AGCATCCCAG TGAGGCACAG 
CATGCTAAAA ATAGTGCAAA GTTAGTCAAG CTTTGTATCC CCGAGAGTGA GATCTGGTTA 
GGAGAATCTG CCGAAGACTT TTCACACCTT CAACGAGGTA TCAAAACGCG TGGAGGGAAG 
GTAGCCGTTG TGTACCCTAA TGACGACAGC GTAGCGTTGG AATCGCTGAC TAAAAAGCAA 
CGGACATCAA TCGACACGCT GATCTTGATT GATGCCACAT GGCGTAAGGC ATACAAGATA 
TGGCAGCTAA ATCCGTGGTT AAAGCAATAT TCGTCGTGGC ATTTTGCTAA GCCCCCTGCA 
AGTCAATATG TCATTCGTAA AACATCCATT GAAGGCGGTT TATCAACGTT AGAAGCCTTA 
GCTCATGCGC TTACATTAAC CCAAGAGATA GATACAAGTG AGTTGGTAAC TACATTTGAT 
GAAATGCAAA ATCGCGTTTT TGCCCGTCAT ACCTCGAAGC ACGAAACCTA A
 
Protein sequence
MKRAICRRCD YPLSVCICDL LCEVISSQRI IILQHPSEAQ HAKNSAKLVK LCIPESEIWL 
GESAEDFSHL QRGIKTRGGK VAVVYPNDDS VALESLTKKQ RTSIDTLILI DATWRKAYKI 
WQLNPWLKQY SSWHFAKPPA SQYVIRKTSI EGGLSTLEAL AHALTLTQEI DTSELVTTFD 
EMQNRVFARH TSKHET