| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4288 |
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| Symbol | |
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| ID | 4176078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5159500 |
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| End bp | 5160531 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057325 |
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| Product | transcription factor jumonji/aspartyl beta-hydroxylase |
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| Protein accession | YP_663841 |
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| Protein GI | 109900586 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTTTAT CCAACGTGAA GCAGATTACT CAAAAGGTCA AACATCTTGA GGGGATAACG
CCTAAGAATA TCCCTGAAGC TTTGCTCAAC AGCCAACAAC CCATTGTACT GAAAGGTTAT
TGCAACCACT GGCCATTGGT AAAAGCCGCT AAACGTTCTG ATGACGCGGC GGCACAACAC
CTTTTACAGT TCGATAAAGG TGCCTCTTTT CATACTCATT ATTTGCCGAG CACCGCCCAA
GGGCGAGTGT TCTATAATGC TGCAATGACA GGCTTTAACT TTGAATCAAG CCAACAACGC
TTGCCACAAA TACTGACAGA TATTCTGCAC AACGCTCACA ATAAAACAGG GCAGTGCGTG
TATGTTAGCG CCACCAGCCT TGAGCAAAGT TTGCCTGGTT TACTCGAGCA AATAGACACC
TTACCTGAGC TCAACTCCCC ACTAGTGAAT ATTTGGTTGG GTAATGCGTG TCGTATAGCC
GCGCATTATG ACGTTGCCCA AAACCTAGCA TGCTGCGCGG TTGGTAAAAG ACGCTTTACC
TTGTTTCCTC CTGAGCAATT AGAAAATCTA TACGTTGGTC CGTTAGACAA GGCCCCAGGT
GGTCAAGCAA TTAGTACTGT GGATTTTAAT CAGCCCGACT TAGTGAAATA TCCAAAATTC
GCACTGGCGT TAGAAGCGGC TCAAATGGCT GAATTAGAAG CAGGAGACGC ACTTATCCTC
CCCAGTATGT GGTGGCACCA TGTGCAAGGC TTAAGCGAGT TTAATGTGCT TATTACCCAT
TGGTGGCGCG ACACGCCAGC ACAAATGGGT AGACCTATGA ATGCCTTGTT ATTAGCCATG
ATGAGTATTC GTGACTTACC TGAGCAGCAG CGAAGTGCGT GGAAAAACCA GTTTGACCAT
TATGTCTTTA AGCACCATCC AGAGGATTTT TCGCATATCC CAGAGGCAGC CAAAAGCATA
CTGGCGAGTC CAATGGATGA CACAAACATT AGAAAACTGC GCGCTGATCT ACAAAATAAA
CTCAGACGAT AA
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| Protein sequence | MPLSNVKQIT QKVKHLEGIT PKNIPEALLN SQQPIVLKGY CNHWPLVKAA KRSDDAAAQH
LLQFDKGASF HTHYLPSTAQ GRVFYNAAMT GFNFESSQQR LPQILTDILH NAHNKTGQCV
YVSATSLEQS LPGLLEQIDT LPELNSPLVN IWLGNACRIA AHYDVAQNLA CCAVGKRRFT
LFPPEQLENL YVGPLDKAPG GQAISTVDFN QPDLVKYPKF ALALEAAQMA ELEAGDALIL
PSMWWHHVQG LSEFNVLITH WWRDTPAQMG RPMNALLLAM MSIRDLPEQQ RSAWKNQFDH
YVFKHHPEDF SHIPEAAKSI LASPMDDTNI RKLRADLQNK LRR
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