| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4285 |
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| Symbol | |
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| ID | 4176075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5154012 |
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| End bp | 5155178 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057322 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_663838 |
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| Protein GI | 109900583 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00317648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAAAAA CTATCCCGGT GAGCGATTTA GAAGTCGGCA TGTATGTAGA CTCAATTGCA
GAGCAAAATG GCAACCTGAA AATCAAAAGC AGAGGACGGG TGACAACAAA TACGGCGATC
ACTGCCATGA AGAAGCAGGG TATTGTTTCG ATTGTCATTG ATTTGAGTAA GCAACTGGTA
AAGGAGGAAG AGCCCGCCCC TGATGTGGAA CCACCTTCAG AGCTAGATAT TCCGTTTGCT
GACGAAATAG GTAAGGCGGC AAAGCTTCAC GAGAAAGGTA AAATACTGCA ACGGCGAATG
CTACAGGCGG CTGACAAGGG CTTGCCTATA GATATAGCCA TTCCAAAAGA GTTTACCTCT
AATTTGGTGT CTTCTATTGA CCGTAATCCA AATGCCCTTT TGTGCATGAC TAAAATTCGT
GAAAAAGACA GTTACCTGCT TGAGCATTCC TTAAACGTCG CTATCTTGCT AGCCAACTTT
GCCAATTACT TAGAAATGCC AGAAGAAGAA GTGCAAGAAC TCGCGTTGTC AGGTTTCCTG
CATGATATAG GAAAAATCAA AGTCCCCGAT GAGATCCTAC ATAAGCCGGG TCGTTTGACT
GACCAAGAAA TGGTGATTAT GCGTGATCAC GTATATTACG GTATCCGAGT GTTAGAAGAG
ATGGGTATAC CAGAGCGTAT GATTGAAACT ATTTCACAAC ACCATGAGCG ACTCGACGGT
TATGGTTACC CAGATGGTGC CCGGGGAGAT GAAATAACCA AATTTGGTCG TATGATAGCC
ATAGTGGATA CCTACGATGC TATCACCGCA GATCGTTGCT ATAAAGCGGG AATGCCTTCG
CAAAAAGCAC TGAAAATACT CCATGAAGAA ACACCGTTAA AGTATGATCA ACACTTAGTC
GAGCAGTTCA TAAAATGTAT TGGTGTGTAT CCAGTGGGAA GTTTAGTGAA ACTCTCTAGC
GAGAAAATAG CTGTTGTGAT TAAGCAAAAT GAGAATAACC CCCTTAAACC ACAGGTGAAG
GTTTTTTATT CAGTGCGCAG CGCTCACTAT TTGCCACCCG TGGAGATTGA CTTACTTCAC
TCTCAGTATC GCGTTGAGAA GGCGGTGCTG GCCAGTGAAT TCAAATTAGA CTTCAATCGT
TACTTCAACG AATCTATCGC CATTTAG
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| Protein sequence | MLKTIPVSDL EVGMYVDSIA EQNGNLKIKS RGRVTTNTAI TAMKKQGIVS IVIDLSKQLV
KEEEPAPDVE PPSELDIPFA DEIGKAAKLH EKGKILQRRM LQAADKGLPI DIAIPKEFTS
NLVSSIDRNP NALLCMTKIR EKDSYLLEHS LNVAILLANF ANYLEMPEEE VQELALSGFL
HDIGKIKVPD EILHKPGRLT DQEMVIMRDH VYYGIRVLEE MGIPERMIET ISQHHERLDG
YGYPDGARGD EITKFGRMIA IVDTYDAITA DRCYKAGMPS QKALKILHEE TPLKYDQHLV
EQFIKCIGVY PVGSLVKLSS EKIAVVIKQN ENNPLKPQVK VFYSVRSAHY LPPVEIDLLH
SQYRVEKAVL ASEFKLDFNR YFNESIAI
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