| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4282 |
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| Symbol | rph |
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| ID | 4176072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5151224 |
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| End bp | 5151937 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057319 |
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| Product | ribonuclease PH |
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| Protein accession | YP_663835 |
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| Protein GI | 109900580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.887311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCCGA ACGACAGAAC CGCAAGCCAA ATTCGCCCAG TTACTATTAC CCGTAATTTC
ACTTGTCATG CAGAAGGTTC TGTATTGATT GAGTTCGGCA ACACGAAAGT ATTGTGCAAC
GCCTCTGTGA CTGAAGGTGT GCCCCGTTTC ATGAAAGGCC AAGGTAAAGG CTGGGTGAAT
GCTGAGTACA GTATGTTGCC ACGTGCGACC CATACTCGTT CAGATCGTGA AGCGGCTCGT
GGTAAACAAG GTGGTAGGAC ATTGGAAATT CAGCGGTTAA TCGCTCGTTC GTTACGTGCC
GCGCTTGATT TAAAACTGCT TGGCGAAAAC ACCATAGTTG TAGATTGTGA TGTCATTCAG
GCTGATGGCG GTACACGCAC TGCATCCATC ACTGGCGCGT GTGTGGCACT TGTTGATGCG
CTTACATGGA TGCGCAGCAA AGGGATCATC AAAACCAACC CTATGAAGCA CATGATCGCG
GCGATTTCTG TGGGTATATA CAAGGGCAAT GCGATTGCTG ACTTGGAATA CACAGAGGAC
TCAGAAGCAG AAACCGATAT GAATGTGGTG ATGACCGATA CGGGTAAAAT GATCGAAGTA
CAAGGTACTG CTGAAGGCGA ACCTTTTAGT ATTGAAGAAA TGCATGAAAT GCTAGAGCTG
GCAAAACACG GTATCCGTGA ATTGTTCGAC GAGCAAAAAG CTGCACTTAA CTAA
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| Protein sequence | MRPNDRTASQ IRPVTITRNF TCHAEGSVLI EFGNTKVLCN ASVTEGVPRF MKGQGKGWVN
AEYSMLPRAT HTRSDREAAR GKQGGRTLEI QRLIARSLRA ALDLKLLGEN TIVVDCDVIQ
ADGGTRTASI TGACVALVDA LTWMRSKGII KTNPMKHMIA AISVGIYKGN AIADLEYTED
SEAETDMNVV MTDTGKMIEV QGTAEGEPFS IEEMHEMLEL AKHGIRELFD EQKAALN
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