| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4274 |
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| Symbol | |
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| ID | 4176064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5144067 |
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| End bp | 5145305 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057311 |
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| Product | hypothetical protein |
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| Protein accession | YP_663827 |
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| Protein GI | 109900572 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA TAATTTACGC CATACCCTTT TTCTTTTTAT TGATTGCTTT AGAGCTAGTG
GCTGAGTATT TCAGAAAAAC AGATTACTAC CGGACTAATG ATGCGATTAA TAGCTTAACG
GCGGGAGTGT TGAGCCGTAT GTTCGGAATT TTGAAAGCCT TAGTGCCCTT TACTTTATAC
GTGGTCTTAT ATGATAACTA TGCGCTTTTC ACCTTGGGAG ATAACATCTG GCTAGGGCTG
ATTGCATTTG TGCTATATGA CTTTTGCTAT TACTGGAATC ACAGATTTGG CCATGAAATG
AGTATTTTGT GGGCCGCTCA TGTGGTGCAC CACTCTAGTG AAGAGTACAA CCTCACCACC
GCCTTGCGAC AAACGAGCGG CAGTTTTTTA AGTTGGATAT TTTACCTACC CCTAGCCTTT
CTCGGTGTCG ACCCGATGCT ACTGCTTACC GTGGGCTCAC TCAATCTTAT TTATCAGTTT
TGGGTGCACA CACGTCACAT TGGTAGGCTA GGCTGGTTAG AATGGATATT CGTAACACCC
TCTAATCATC GAGCTCACCA TGCGCAAAAC CAGATCTATA TTGACCGCAA TTACGGGGGA
GTTTTCATTA TATGGGATCG GTTGTTCGGC TCATTTCAAG ATGAATTGGA CGAAGAGCCC
CCTATTTACG GGATCCGCAA AGCGCTACAC AGTTGGAACC CTATCTATGC CAACACCCAT
GTTTATCAGC AACTCATAAA GGATAGCTGG CGAACCAAAG CGTGGTCAGA CAAATTCAAA
GTATGGTTTG GTAAAACTGG CTGGCGCCCC GCTGATATGG AGCGCGATTA TCCTCTGGGG
CGGGTAGATT TAACGCGTTT TAAAAAGTTC GACATAGCCA TTTCAACACG ACGTAAAACT
TATGCACTGT TACAGCACGG GCTAACGACT TTTATAGGCT TAGTATTTTT ATTAAATATT
ACCCATTTAG CGCTTATGCA ACAGGTACTC GTAATTGCTT GGGTCATATT CGCCAGTCTG
TCAGTAGGTG AAGTATTGGC GATGAAAGTA TCAGGTTGGT GGCTAGAGGT AGCAAAATAC
GTAGTGTTAA TAAGTGTGCT CGCGACTCAG CCGATCCCTT TATGGCTAAT GTTAAGCATT
TCATCTTTTA CTGTGCTGAG TATTGCTATG TGGCCGAGCT TAAAAAAAGA ATACACCAAC
ATCGTTGAGC AAAAAGAAAA TATGGCGATT ACTGGATGA
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| Protein sequence | MSYIIYAIPF FFLLIALELV AEYFRKTDYY RTNDAINSLT AGVLSRMFGI LKALVPFTLY
VVLYDNYALF TLGDNIWLGL IAFVLYDFCY YWNHRFGHEM SILWAAHVVH HSSEEYNLTT
ALRQTSGSFL SWIFYLPLAF LGVDPMLLLT VGSLNLIYQF WVHTRHIGRL GWLEWIFVTP
SNHRAHHAQN QIYIDRNYGG VFIIWDRLFG SFQDELDEEP PIYGIRKALH SWNPIYANTH
VYQQLIKDSW RTKAWSDKFK VWFGKTGWRP ADMERDYPLG RVDLTRFKKF DIAISTRRKT
YALLQHGLTT FIGLVFLLNI THLALMQQVL VIAWVIFASL SVGEVLAMKV SGWWLEVAKY
VVLISVLATQ PIPLWLMLSI SSFTVLSIAM WPSLKKEYTN IVEQKENMAI TG
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