| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4264 |
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| Symbol | |
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| ID | 4176054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5132552 |
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| End bp | 5133040 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057301 |
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| Product | invasion associated locus B |
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| Protein accession | YP_663817 |
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| Protein GI | 109900562 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.536933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTTTA TTTTTGCTTT TTTTATTCTC GGCATAAGCA TTTCTAGTGC GGTACAAGCA
CAGAGTAAGC AGAATTTTGG TTCGTGGAGT TTACTGTGTG GCGAGCACGG AAATTGTTCT
GTTAGTCAGT TGGTGGCGAT GGATCCTGAG GGAACGAAGG TCTTGCTGGG TGCCAACATA
AATTTCTCTA TGTCGAACAG CTTTCCCGTT TTAATGCTAC GTATGCCACC AAATTTGAAT
AAAAGCAGCG GCGTTGGCAT TAAGATTGAT GATAACAATG CTATTCAAGT TGCCTTGTCT
CAGTGCACAT CTGTGGCATG TCAAAGCGTG ATTAAAATCG ATAAAACTTT GTTTGCGGAA
ATGCGTGGTG GTCGAGTCGC AAAGGTCGCA TTCGCGTTAG AAAAAAGTAA GCAACTAACC
TTACCCTTGT CACTTGAAGG GTTTGCAGAC GCATATGCAG CTTTACTTGC TACGCGCAAA
GCATCTTAA
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| Protein sequence | MRFIFAFFIL GISISSAVQA QSKQNFGSWS LLCGEHGNCS VSQLVAMDPE GTKVLLGANI
NFSMSNSFPV LMLRMPPNLN KSSGVGIKID DNNAIQVALS QCTSVACQSV IKIDKTLFAE
MRGGRVAKVA FALEKSKQLT LPLSLEGFAD AYAALLATRK AS
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