| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4253 |
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| Symbol | |
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| ID | 4176043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5119825 |
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| End bp | 5121051 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057290 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_663806 |
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| Protein GI | 109900551 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTGG TATTAGCTAA AAAATCACCT GGCGCATCAA GGCTCACATT GCATTCATTT
TCATTTCGCA AATACACCAG AAGGCTCCAC TTGTGGTTGG GCTTAAGTCT CGGCGTATTA
CTGACAATAA TATGCCTCTC AGGGGCGGTG TTAGTATTTT ATGTTGAGAT AGATACTTGG
CTACACCCAG AACTCGAACG TTCGCAACTG GCCACAGATA GCAGTTGGGA CAGCGCATTA
CATACACTCA ATAAAACGTA TCCGAATAAA AAAGGCCCTT GGCGAATTGA GGTGAGTGAC
AGCAAAAGAG CAATATCAGC TCGTTATTAC AACCCCGTAG AGACTCGTAG TGAAGGGTTT
GCCCCCCTAA TGGTGTGGTT AAGCAGTGAC GGCCTATCAG TGCTTCGCGA AGACTATTGG
GGGCACTATT TGGCCACTTG GCTATACAAT TTACACTACA CGTTGCTCTT TGGTGAAATA
GGCACTTTCG TCATAGGCTA CATAGGTCTA GCGACATTAT TCTTGCTAGT GAGCGGATTA
GTTTCATGGT GGCCGAAGCA GGGCCAGTGG CATAGGGCGT TCACATTTAA ACGACGACGC
TCACGTATCG GTTTGCTTTA CGATTGGCAC AAAATACTGG GACTCGCGAG TGCCGTTCCC
TTGTTACTGC TTGTTGCCAC TGGCGTGATG TTATCCCTGC CACAAGAAAC AAATAGGGTC
CTGGGGCTAC TGTTTTCGCC AGTGCAAACA GCCTCTAAAC TTAGCGGTAT TGCGAATAAG
ACAATACAGC ATACTGTGCC GATTTCTGAT GCAATTAACG CAGCGAGACA GGCAAACGTC
GCTCAAAATG GCGCTGACCT ACGGCAATCA CGTCTGGCAT GGATCCAAAC CCCCGACAAC
AATTTAAGCG CTCAACAATT CTATACGTTT CGCTTCCAAA TACCTGAAGA TCCATCTCAT
CGCTTCCCCA ATACATTTGT ATACGTGGAT GCCCATTCAG GGCAGATCAT TAGTACATAT
TCTGCGTGGA AGCATGGCCC TGCAAATAGC ATAAAAGGTT GGTTGCATGC TTTGCACAAC
GGCAGTGTAG GGGGCTTAGC ACTTCGGATT TTGTGGGTAA TTTGTGGCTC AATTGTATTC
GCTTTATTTA GCTTAGGCTT CACTCGCTGG CGATTGCGCA CGAGCAAAAA AGGGTCTTCA
ACTTTGAAAA CGCAATCCCT TCGTTAG
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| Protein sequence | MELVLAKKSP GASRLTLHSF SFRKYTRRLH LWLGLSLGVL LTIICLSGAV LVFYVEIDTW
LHPELERSQL ATDSSWDSAL HTLNKTYPNK KGPWRIEVSD SKRAISARYY NPVETRSEGF
APLMVWLSSD GLSVLREDYW GHYLATWLYN LHYTLLFGEI GTFVIGYIGL ATLFLLVSGL
VSWWPKQGQW HRAFTFKRRR SRIGLLYDWH KILGLASAVP LLLLVATGVM LSLPQETNRV
LGLLFSPVQT ASKLSGIANK TIQHTVPISD AINAARQANV AQNGADLRQS RLAWIQTPDN
NLSAQQFYTF RFQIPEDPSH RFPNTFVYVD AHSGQIISTY SAWKHGPANS IKGWLHALHN
GSVGGLALRI LWVICGSIVF ALFSLGFTRW RLRTSKKGSS TLKTQSLR
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