| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4246 |
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| Symbol | |
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| ID | 4176036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5108740 |
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| End bp | 5109894 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057283 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_663799 |
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| Protein GI | 109900544 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAA TTTCGTTGAG TGTTATGGCA ATGTTAGGTG CATTTAATTG CAGCACCGCT
TTTGCAGATT CAGTGTCCGA CTTAGATCAG TACCAATTAA ACATGCGCAA AGGTGTGACT
GATATCAGCG CCGAGGTATA TGACCTACAT ATGTTGATGT TCATCATATG TGTGGTTATC
GCTGTTGGTG TGTTTGGCGC TATGTTCTAC TCCATTTTAT TTCATCGTAA ATCTCGTGGG
GCTAAGCCTG CAAACTTCCA CGAGAGTGTT AAAGTTGAAA TCGCTTGGAC CGTCATCCCT
TTTATTATCC TCATTGTAAT GGCTATCCCT GCAGCCAAAA CGTTGATCGC TATGGAGGAT
GCCAGTGAAC CGGAAGTGAC GGTGTTGGTA ACAGGGTCAC AATGGAAGTG GCACTACAAG
TACATGGATA ACGACGTCGA ATTTTATTCT CGCATGGCAA CTCAAGCCGA TGAAATCACA
GGTAAATTAG ACAAGGGTGT TAATTACCTC TTAGAAGTAG ACCAACCTTT GGTGATCCCT
ACCGATAAAC GTGTGCGTTT TCTTATTACC TCAGACGATG TTATTCATTC TTGGTGGGTA
CCAGACTTCG CAATCAAGCA AGACGCTAAT CCAGGTTTTA TTAATGATGC TTGGGCTAAG
GTCAATGAAC CGGGTATTTA CCGTGGGCAG TGTGCTGAAT TATGCGGAAA GGATCACGGG
TTCATGCCGG TTGTGGTTAT CGCAAAAGAG CCCGCCGAAT ATGATAAGTG GATAGGCGAG
CGTCAAGCCA TCCAAGAACA GGCAAAAGCT GAAGAGCAAA GATTACTAGC AATGAACATG
AGCAAAGAAG AGCTCATGAG CAATGGTCAA AAAATTTACA ATTCTGCATG TGCAGCCTGT
CATATGCCTA ATGGTGAAGG GTTGCCAGGG GTATTCCCAG CATTAAAAGG GAGTGACATT
GCGCTGAACG ATATGGCTGC GCATATTGAT ATCGTGCTTA ACGGTAAATC AGGTACCGCA
ATGGCCGCCT TCGCTAAACA GTTAACAATG TCAGAACTTG CCGCAGTGAT TACCTATGAG
CGAAATGCGT GGGGTAACGA TACGGGTGAT CTAGTTCAGG CGAAAGACAT TAACGCTGCA
TTAAACGGGC AGTAG
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| Protein sequence | MKKISLSVMA MLGAFNCSTA FADSVSDLDQ YQLNMRKGVT DISAEVYDLH MLMFIICVVI
AVGVFGAMFY SILFHRKSRG AKPANFHESV KVEIAWTVIP FIILIVMAIP AAKTLIAMED
ASEPEVTVLV TGSQWKWHYK YMDNDVEFYS RMATQADEIT GKLDKGVNYL LEVDQPLVIP
TDKRVRFLIT SDDVIHSWWV PDFAIKQDAN PGFINDAWAK VNEPGIYRGQ CAELCGKDHG
FMPVVVIAKE PAEYDKWIGE RQAIQEQAKA EEQRLLAMNM SKEELMSNGQ KIYNSACAAC
HMPNGEGLPG VFPALKGSDI ALNDMAAHID IVLNGKSGTA MAAFAKQLTM SELAAVITYE
RNAWGNDTGD LVQAKDINAA LNGQ
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