Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4237 |
Symbol | |
ID | 4176027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 5101245 |
End bp | 5101883 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638057274 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_663790 |
Protein GI | 109900535 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCAGAT TAAATGTAGC GTTGATCGCC TTAGTGGCAT TGGTTGTCGG TGTTGTGATC GCAGTGACTA TAGCGCCCCC GAAGAGTGAT GAAACGCAGT ATATTAAGCT TTACCCGCAG GCGAGAGCCT TGCCTGATTT TTCTTTGACT GACAGTAAAG GCCAACCACT AACCAATAAA AACTTGCAAA ATCAATGGAC GCTCGTTTTC GTTGGCTACA CTTTTTGCCC TGATATTTGT CCCACAACGC TGGCTGACTT AAGCAGCATT TATCCTGAGT TGCAACGCAT TAAAGGGCCT TACCCGGTCA AGGTGGCGTT TATTTCGGTC GACCCAGCGC GAGATACAAC AGAAAGACTA GCGGAATATA TCGATTTTTT TGAACCTGAC TTTATAGCCG CAACCGGCGA GCATGCTGAT TTGTTTCCTT TCGTTCGCGC AATGGGCATG ATGTATTCGA CGTCACAAAG CACAGACGAC GAAAACTACT TGGTGGATCA CAGTTCATCT GTGGTGGTGG TAAATCCGCA AGGTCATGTT GTGGGTCGCT TTAAACCAGA GTTTGCCCCA GGCAAAGTTG CAGTGAGCGA CAGTAAACGG ATTCTGCATG ACATGACTAT CTTAGCGACA ACCAAATAA
|
Protein sequence | MSRLNVALIA LVALVVGVVI AVTIAPPKSD ETQYIKLYPQ ARALPDFSLT DSKGQPLTNK NLQNQWTLVF VGYTFCPDIC PTTLADLSSI YPELQRIKGP YPVKVAFISV DPARDTTERL AEYIDFFEPD FIAATGEHAD LFPFVRAMGM MYSTSQSTDD ENYLVDHSSS VVVVNPQGHV VGRFKPEFAP GKVAVSDSKR ILHDMTILAT TK
|
| |