| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4234 |
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| Symbol | |
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| ID | 4176024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5098121 |
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| End bp | 5099464 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057271 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_663787 |
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| Protein GI | 109900532 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTATAT CTCCAGCTCG TGAACAACAC CGTTTTTGGC ACTTGGCCTC CCATAAACAG
CTGATTCTGT TAGCGCTACC AATGATCTTA AGCAATATAA CCACGCCACT TATTGGTATG
GTCGATACTG CTGTGTTAGG TCATATGGGC AGTAGTCATT ATCTGGCTGG CGCAGCAATA
GCCTCTCTAA TTTTAACTCA GACCTATTGG TTGTGTGGCT TTATTCGTAT GTCGAGCACA
GGCTTAAGCG CCCAGGCCAA AGGCGAGCAA AACAATGAAA ACAAGAGTAG AGTGTTCTGG
CAAAGCTGCA GCGTAGCTTT GGTTATCGGT CTGGCAATAT GGGCCGCGCA AACACCTCTA
CTGACATTAG GAATTCATTT CGCTCAACCA GAAGCGCAAC TTCTTAATGT TATTCAACAA
TATTTTAGTG TGCGTATTAC CGGGGCTCCA GCCGCTTTGG TCAATCTGGC CATCATTGGC
TGGTTGATAG GCCAACAAAA AACAAAGCAA GTACTTTATA TTCAAATATT TGCCAATTTA
CTCAATGCTG GGTTAAGTGT CTTACTGGTA TTCGTGTTTG ATGCAGGCGT TAAGGGTGTC
GCGGTAGCAA GTGTTGCTGC TGAATACAGT ATTTTGATAC TTGGCGTTTG GGTGGCGATA
AAAGGAATGG GCTTACAAAA GCCTCATTGG GGCTTGTGGC GGTGGTCTTC ATTGGCGCAG
CTGATGAGCC TAAACGGTTA TAGTTTTGTG CGTAATTTGG CACTGCAATT GTGCTTGGCG
TTCGTTATTT TTCAAGGGGC CAGATTTGGG CCATTAACGG CCGCGAGCAA CGCGATTATC
ATGCAATTTT TTGCACTGAT TGCGCTAGGG TTAGACGGCA TTGCTTACGC TGTTGAGGCG
TTAACAGGTG AAGCTAAAGG AAAAAAAGAC GCCCGTGAAA TTAATCGCGT GGTAATGCGC
GGTTTATTTT GGTCATCCGT AGTGGCTGGC GGTTACAGCT TAAGCTTTGT AGTATTTGGT
CAGCAGATCA TCGCAATACT GACGGATTTG CCAGAACTTA GAAACTTCAC TGCGCAGTAC
CTATTCATCA TCTGGTTGTT GCCCATCGTG AGTCATTGGT GTTTCCTACT GGACGGCGTG
TTTGTGGGGC TAACACGAGC AAAGGCAATG CAAAACAGTA TGTTGCTTAG CGCCACGTTT
TTCTTTTTTC CTAGCTGGTG GCTACTGCAA GAATATCAAA ACTATGCTTT GTGGGTCGCA
TTGTTGTTGT TAATGCTCGG GCGGGGCCTT AGTCTTGGCG GTTACTTTGC TTATCTTTAT
CGCGGTGGGC GTTTGATAAA CTAA
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| Protein sequence | MAISPAREQH RFWHLASHKQ LILLALPMIL SNITTPLIGM VDTAVLGHMG SSHYLAGAAI
ASLILTQTYW LCGFIRMSST GLSAQAKGEQ NNENKSRVFW QSCSVALVIG LAIWAAQTPL
LTLGIHFAQP EAQLLNVIQQ YFSVRITGAP AALVNLAIIG WLIGQQKTKQ VLYIQIFANL
LNAGLSVLLV FVFDAGVKGV AVASVAAEYS ILILGVWVAI KGMGLQKPHW GLWRWSSLAQ
LMSLNGYSFV RNLALQLCLA FVIFQGARFG PLTAASNAII MQFFALIALG LDGIAYAVEA
LTGEAKGKKD AREINRVVMR GLFWSSVVAG GYSLSFVVFG QQIIAILTDL PELRNFTAQY
LFIIWLLPIV SHWCFLLDGV FVGLTRAKAM QNSMLLSATF FFFPSWWLLQ EYQNYALWVA
LLLLMLGRGL SLGGYFAYLY RGGRLIN
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