| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4233 |
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| Symbol | |
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| ID | 4176023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5097307 |
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| End bp | 5097885 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057270 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_663786 |
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| Protein GI | 109900531 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCTA TTTCAGATAC AGCCCAAGCG CACTTTTGTA AATTGCTTGA AAAACAAGAG
CCTGACACTA ATATTCGGGT TTTTGTCGTT AACCCCGGTA CGCCTAGCGC TGAATGTGGT
GTTTCCTATT GCCCACCAGA CGCCGTGGAA TCAACCGACA CCACCCTAGA ATTTAATGGG
TTTGATGCCG TTGTTGATGC AGAAAGTGCT CCTTTTTTAA GCGAAGCAGA AATTGACTTT
GTGACTGACC AAATGGGCTC TCAATTAACC TTGAAAGCAC CAAACGCCAA AGCGCGTAAA
GTTGATGACG ATGCCCCACT AGAAGAGCGC ATTAATTATA TGATTGAAGC AGAGATCAAT
CCGCAACTTG CCAGCCACGG CGGTAAGGTT ATGCTGATGG AGATCACCGA AAAAGGTGAA
GCTATACTTC AGTTTGGCGG CGGTTGTAAC GGCTGTTCAA TGGTTGATGT GACGCTTAAA
GATGGTATTG AAAAGCAAAT GTTAGCCCAA TTTTCTGGCG AGTTAACAGC AGTGAAAGAC
GCTACCGAAC ATGAAGCCGG CGAGCACTCT TACTACTAA
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| Protein sequence | MISISDTAQA HFCKLLEKQE PDTNIRVFVV NPGTPSAECG VSYCPPDAVE STDTTLEFNG
FDAVVDAESA PFLSEAEIDF VTDQMGSQLT LKAPNAKARK VDDDAPLEER INYMIEAEIN
PQLASHGGKV MLMEITEKGE AILQFGGGCN GCSMVDVTLK DGIEKQMLAQ FSGELTAVKD
ATEHEAGEHS YY
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