Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4222 |
Symbol | |
ID | 4176011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 5084124 |
End bp | 5084450 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638057258 |
Product | thioredoxin |
Protein accession | YP_663775 |
Protein GI | 109900520 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0161465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA AAATTATCCA GTTATCGGAC GATAGTTTCG AGGCAGATGT TATCAATGCT ACTGGTCCTG TACTAGTTGA CTTCTGGGCG GAATGGTGCG GTCCGTGTAA GATGATTGCG CCAATTTTGC ATGAAATTGC TGACGAATTC GACGGCAAGT TAACAGTTGG CAAGCTGAAT GTCGATGAAA ATAACGAAAC ACCACCTAAG TATGGTATCC GTGGCATCCC TACTTTGCTT TTATTTAAAG GCGGAAATGT AGCTGCAACT AAAGTCGGCG CACTATCTAA AAGCCAATTA GAAGAGTTTT TGAACGAAAA CATCTAA
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Protein sequence | MSDKIIQLSD DSFEADVINA TGPVLVDFWA EWCGPCKMIA PILHEIADEF DGKLTVGKLN VDENNETPPK YGIRGIPTLL LFKGGNVAAT KVGALSKSQL EEFLNENI
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