Gene Patl_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4222 
Symbol 
ID4176011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp5084124 
End bp5084450 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content42% 
IMG OID638057258 
Productthioredoxin 
Protein accessionYP_663775 
Protein GI109900520 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0161465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA AAATTATCCA GTTATCGGAC GATAGTTTCG AGGCAGATGT TATCAATGCT 
ACTGGTCCTG TACTAGTTGA CTTCTGGGCG GAATGGTGCG GTCCGTGTAA GATGATTGCG
CCAATTTTGC ATGAAATTGC TGACGAATTC GACGGCAAGT TAACAGTTGG CAAGCTGAAT
GTCGATGAAA ATAACGAAAC ACCACCTAAG TATGGTATCC GTGGCATCCC TACTTTGCTT
TTATTTAAAG GCGGAAATGT AGCTGCAACT AAAGTCGGCG CACTATCTAA AAGCCAATTA
GAAGAGTTTT TGAACGAAAA CATCTAA
 
Protein sequence
MSDKIIQLSD DSFEADVINA TGPVLVDFWA EWCGPCKMIA PILHEIADEF DGKLTVGKLN 
VDENNETPPK YGIRGIPTLL LFKGGNVAAT KVGALSKSQL EEFLNENI