| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4221 |
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| Symbol | |
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| ID | 4176010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5082757 |
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| End bp | 5084022 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057257 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_663774 |
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| Protein GI | 109900519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0989994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACAA CTCATTTAAC CGAAACACAT TTCGCGGACT TGCCAATCAA TGAGCAAGTC
GTTAAGGCGT TATCCGCCGC AAACTTTAGT CACTGCACGC CCATTCAAGC GTTAAGCTTG
CCCCCTCTAT TAGAAGGGAA TGACATAGCA GGTCAAGCGC AAACCGGAAC CGGTAAAACT
ATCGCGTTCT TGGTGGCAAC TTTTCATTAC TTGCTAAGTA ATCCGCAGCC CACTAAAAAA
CAACCAAGAG CCATTATTAT GGCGCCAACC AGAGAGTTGG CGGTTCAGAT CTTTAACGAT
GCTGAACTGC TAAGTCAACA CACTGGTTTG TCTCTCGGTT TGATTTATGG GGGCGAGGGT
TATCAAAGTC AACGGGAAAA GCTGGAAGAA GGTGTAGATA TTATTATCGG CACTACCGGC
AGGATCATTG ACTACTACAA GCAGAACATT TTTTCGTTAG CCGGTATTCA AGTCGCTGTA
CTTGATGAAG CGGACCGTAT GTTCGATTTA GGCTTTATTA AAGATATTCG TTATCTTTTC
AATCGCATGC CTAAACCGAC AGAGCGTTTA AGCATGTTGT TCTCGGCGAC GTTGTCGTAC
CGAGTACAAG AGCTAGCTTA TGAGCACATG GATAACCCCA CTCACGTGCA AGTTGAGCCC
GAACGCAAAA CCGGCACGCG CATCAAAGAA GAGCTCTTTT ATCCTTCTGA TGAAGATAAA
ATGGCCTTGC TACTTAGTTT GATGGAAGAA GAATGGCCGG ATAAAGCCAT TGTTTTTGCG
AATACTAAGC ACAGCTGTGA GAAAGTTGCC GACTGGCTAC AAGCAGATGG TCATCGAGTG
GGTCTATTAA GCGGTGATGT TCCTCAGAAC AAGCGCTTAA AAATCCTTGA AGATTTCACG
TCTGGCAAGC TAGATATACT GGTTGCTACC GATGTGGCCG CTCGAGGCTT GCACATTCCT
ATGGTTAGTC ACGTGTTTAA CTATGACTTA CCAGATGATG CTGAAGATTA CGTACATCGT
ATCGGCCGCA CCGGTCGTGC TGGTCAAAGC GGTAGCTCAA TCAGCTTTGC TTGTGAACGT
TACGCGTTAA ACTTGCCAGC GATTGAAACC TACATTGAGC ATGCTATTCC GGTAACAGAA
TATCAAGCTG ATGCACTACT TCGAGATGTG ACACCACCTA AGCCTCGCCA TAAAAAGCGA
ATGCAGAATG GTCGCAACCC TCAGAAGCGC CAATCATCAG GCTCGCGTAA CCGCAGGAAG
CCATGA
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| Protein sequence | MQTTHLTETH FADLPINEQV VKALSAANFS HCTPIQALSL PPLLEGNDIA GQAQTGTGKT
IAFLVATFHY LLSNPQPTKK QPRAIIMAPT RELAVQIFND AELLSQHTGL SLGLIYGGEG
YQSQREKLEE GVDIIIGTTG RIIDYYKQNI FSLAGIQVAV LDEADRMFDL GFIKDIRYLF
NRMPKPTERL SMLFSATLSY RVQELAYEHM DNPTHVQVEP ERKTGTRIKE ELFYPSDEDK
MALLLSLMEE EWPDKAIVFA NTKHSCEKVA DWLQADGHRV GLLSGDVPQN KRLKILEDFT
SGKLDILVAT DVAARGLHIP MVSHVFNYDL PDDAEDYVHR IGRTGRAGQS GSSISFACER
YALNLPAIET YIEHAIPVTE YQADALLRDV TPPKPRHKKR MQNGRNPQKR QSSGSRNRRK
P
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