| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4214 |
|---|
| Symbol | |
|---|
| ID | 4176003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 5075616 |
|---|
| End bp | 5075915 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638057250 |
|---|
| Product | twin-arginine translocation protein, TatB subunit |
|---|
| Protein accession | YP_663767 |
|---|
| Protein GI | 109900512 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA TTGGCTTTCT CGAATTACTC GTTATTGGCG TGGTAGCTCT TTTGGTGCTG
GGCCCTGAGC GTTTGCCTGG CGCAATTCGC TCGACCATGC GCACTGTGCG CAGTGTTAAA
AGCATGGCCA CGGGATTTCG GCAAGAAGTG GAACAGCAGT TTAAAATTCA CGAATTACAC
GAAAACCTGA AAAAAGCTGA GCAACAAGGT TTAGAGAATC TATCACCTGA ATTGCAAAAA
TCCGTAGATG AACTGCGAGA CGCAGCGAAG TCTGTTCAGA AACCATACGA AAAAAAGTAG
|
|---|
| Protein sequence | MFDIGFLELL VIGVVALLVL GPERLPGAIR STMRTVRSVK SMATGFRQEV EQQFKIHELH
ENLKKAEQQG LENLSPELQK SVDELRDAAK SVQKPYEKK
|
|---|
| |