Gene Patl_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4210 
Symbol 
ID4175999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5071939 
End bp5072580 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID638057246 
Producthypothetical protein 
Protein accessionYP_663763 
Protein GI109900508 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTCG GGCAGCTGAT AAGCGCGGGC GTTGAGTTAA CCCTTAACCA ACTTTTGCAG 
CTCGATCCTG ATTGTAAACC TCGCTTAAAA AAGTTAGCGG GCAAACAACT GCAGGTCACT 
ATTAATGAGT TACCTTGGTC TTTACTGTTT ACTTTTTCTG AGCAAATTGA TGTCAGCGCC 
TTGCAGCAAG ATCAACAGTC AGCACCCGCT GATGCCGCAG CAGATTGCCA TATTACTCTT 
AGTTTAAGCA CGCTTAGCGC ATTAAGTGAC AGCAGTAAAA TCAGTCAGCT GATTCAACAA 
GGAAAGCTAG ATTTAGACGG TGATATCGAT GTTGCCCAAG GATTTAGCAA TCTAATGAAA 
GAGCTGGATA TTGATTGGGA AGAACAGTTA TCTAAATACA CAGGTGACGT GGTTGCTCAT 
CAAACCTTTA GTAGCGTGAA AGCGTTCTTC AATACGGCTC AACAAGAAGT GGAGAAACTC 
GCTGACCAGC TCAGCGCGCA TTTAACCCAA CCTGAAGCCG TCGCGGTGAC CGAAATCGAA 
GTTGCGGATT TTTGTGATCA GGTAAATCAC CTACGTAGCG CCAGCGATAG GCTTGAAGCG 
CGAATCGATC ACCTCATTGC CTCACAACAG GATGACCAAT AA
 
Protein sequence
MLVGQLISAG VELTLNQLLQ LDPDCKPRLK KLAGKQLQVT INELPWSLLF TFSEQIDVSA 
LQQDQQSAPA DAAADCHITL SLSTLSALSD SSKISQLIQQ GKLDLDGDID VAQGFSNLMK 
ELDIDWEEQL SKYTGDVVAH QTFSSVKAFF NTAQQEVEKL ADQLSAHLTQ PEAVAVTEIE 
VADFCDQVNH LRSASDRLEA RIDHLIASQQ DDQ