Gene Patl_4208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4208 
Symbol 
ID4175997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5070285 
End bp5070992 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content48% 
IMG OID638057244 
Producthypothetical protein 
Protein accessionYP_663761 
Protein GI109900506 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACA ACGTTTTAGC CAATTTGGAA CATTATCAGG CCATTTACCA ACGTGCCAGC 
GAACGAAAAG GCGGCCCTGG CGCCGTTGAA AGTTTACTTA GTGACCCCCT TGCCGATAAA 
GACATCGCCC AATTGGGTGA TGATCGTTTC TTAGCTGAAT TTAGCAAAAA GGTCTTTCAA 
TCAGGTTTTG TATGGCGAGT GGTACGCAAT AAGTGGCCTG AGTTCGAACG TTTGTTTTTC 
GAATTTAATA TCGACAAAGT ACTGCTTATG CCGGATGAAA TGCTTGAAAA GCGCGCTCAA 
GATCCAGCCA TTATTCGCAA CTATAAAAAA GTGCAAACCA TTCGCGACAA CGCCATCATG 
ATCGACTCTG TTCGCCGTGA TCACGACAGT TTTGCGCAGT TTGTCGCTAA CTGGCCTGTG 
GCTGATATCA CTGGTCTGTG GGTCTATTTG AAGAAGCATG GCGCTCGCTT AGGTGGCAAC 
ACAGGCCCTT ACGCGCTGCG TGCATTAGGC AAGGATACTT TTTTGCTGAC TCGCGATGTC 
ACGAGTTACT TTAGCCAACG GGATATTATT TCAGGTGGAG TGACATCCAA GCGTAGCCTA 
AGTGCAATCC AAGCAGCGTT TAATCAGTTA CAGGCGCAAA GTGGCCGCTC TATGCAGGCC 
CTCAGTACGC TTATTGCTAT CAGCGTAGGA GACAATTTAG CAGCCTGA
 
Protein sequence
MSDNVLANLE HYQAIYQRAS ERKGGPGAVE SLLSDPLADK DIAQLGDDRF LAEFSKKVFQ 
SGFVWRVVRN KWPEFERLFF EFNIDKVLLM PDEMLEKRAQ DPAIIRNYKK VQTIRDNAIM 
IDSVRRDHDS FAQFVANWPV ADITGLWVYL KKHGARLGGN TGPYALRALG KDTFLLTRDV 
TSYFSQRDII SGGVTSKRSL SAIQAAFNQL QAQSGRSMQA LSTLIAISVG DNLAA