| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4205 |
|---|
| Symbol | |
|---|
| ID | 4175994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 5065467 |
|---|
| End bp | 5066267 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638057241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663758 |
|---|
| Protein GI | 109900503 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1723] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.418347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTTA GTAATAATCG CATTTCAGCC ATTTACTTAG GTAATGAAGA GTCGATTTTA
AGTTCTGAAC AAGATTGGTT AAATGCAGAG CGCGGCGCGC GTTATCGCGA CGCGGTGCAT
ATTGCGTTAC CTGGTGGTGA AGTGTGGTTA TTTGACTACG GTATTGCCGT ATTTTGGGGT
GTGGATGAAG ACGAACGGTT AGCGTTATTG CATCGGTTAA GTTTGGCTGA AGGTTTATTA
ACTGCCGCTA GCCAAGAGCA TTTTCGCTTT GTGTTAGATG CACCTGAATC TCGTATCAGT
CAGGATACCG TGAGTTTGGC CCAAGATGAT CATTTGTCGC GTTTGGCGGT GAGCCATGCG
TTAGCACAAT CGTTAAAGCT AAACGAATAT GAAAGTCAGG CACAACAAAC AATCCAAGAC
CACGCGCATA TTCCGCAAAC GTTGGCTAAA ACCGGTAAAA TCAAATTATC GCGACGCAAT
ATAGCGAAGA TCCGCGGTAC GTTGTTCAGT ACCAAAAGCG ATATTATTTT GCATTATGGT
TTGCTTGATA CCCCTGAATT TTTCTGGGAA TACCCAGAGT ATGAAAGCAC CTACAATTTG
GCCGCACGCT ATTTAGAAAT TCATCAACGG GTTGAGTTGC TGTCCAAAAA GTTAGCCACC
ATACATGAAT TATTCGACAT GCTTGCGGGT GAACAGAACC ACCAACATTC ATCGTTCTTA
GAATGGATCA TTATCATTCT AATTGCAGTG GAAATTGTGA TGTTTGGCGC AAAGGAAATG
CAGGTACTCT TAGGCCTATG A
|
|---|
| Protein sequence | MKFSNNRISA IYLGNEESIL SSEQDWLNAE RGARYRDAVH IALPGGEVWL FDYGIAVFWG
VDEDERLALL HRLSLAEGLL TAASQEHFRF VLDAPESRIS QDTVSLAQDD HLSRLAVSHA
LAQSLKLNEY ESQAQQTIQD HAHIPQTLAK TGKIKLSRRN IAKIRGTLFS TKSDIILHYG
LLDTPEFFWE YPEYESTYNL AARYLEIHQR VELLSKKLAT IHELFDMLAG EQNHQHSSFL
EWIIIILIAV EIVMFGAKEM QVLLGL
|
|---|
| |