| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4197 |
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| Symbol | |
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| ID | 4175986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5054612 |
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| End bp | 5055817 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057233 |
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| Product | Na+/H+ antiporter NhaA |
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| Protein accession | YP_663750 |
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| Protein GI | 109900495 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.917396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCTT ATCTCGGCAA ATTAATTCAA CATGAAGCAG CCGGTGGCGT ATTACTGGTG
ATAGCTGCAG CCATTGCCAT GGTCCTTGCC AACTCACCTG CATATGATTT TTACAACGGG
CTGCTGGAAA TTCCGGTCAG TATTCGTTTT GGAGCCTTCG AAATCGCCAA GCCGCTGTTG
CTATGGGTTA ACGACGGTTT AATGGCGATA TTCTTTTTTT TAGTCGGCCT AGAAGTAAAA
CGCGAAGTGC TCGGCGGGCA GTTATCATCT GTTTCACAAA TAACTTTGCC TGCTGTTGCC
GCAATAGCGG GAATTGTATT TCCTGCACTC ATTTACGTTT GGTTCAACAT TGACGATCCA
GTCGCTGTAA ACGGTTGGGC TATTCCATCT GCTACTGACA TTGCGTTTGC TGTTGGTGTA
TTCACCATCT TTGGCAAGTT TCTGCCTTTG AGCTTAAAGC TGTTTTTACT TAGCGTCGCG
ATATTCGATG ACATCGGGGC AATTGTTATT ATTGCTTTGT TTTACTCACA AGATCTTTCA
ACCACATCGT TAATCGTGGC GTGCGCAGGC TTTGTAGCGC TATTTTTACT CAACAGATTT
AACGTACGTC GCCAAGCTGC ATATGTCTTG ATAGGCGTAG TGGTGTGGGC TGCAGTGCTT
AAATCTGGCG TTCATGCAAC ATTAGCCGGT TTCGCGCTGG CGTGGTTTAT CCCTCTTAAA
CTTAAGAATG AAGATGGGCA CCCGATGCTG CCGCACCTAG AGCATAAATT GCATCCGTGG
GTAGGCTTTG TGGTGCTGCC TATTTTTGCC TTTGCAAACG CTGGGGTATC GCTATTTGGT
GCAAGCATAT CTGATTTGCT AAACCCCATT ACCTTAGGCA TTGCGGTGGG GCTATTTGTC
GGTAAGCAAC TAGGGATATT TGGTGTGTGC TGGATAACGG TTAAGACAGG ATTAGCCAAA
TTACCTGATG GGTCCACTTG GGTGCAGTTA TATGGCGTGA GTTTGCTGTG CGGTATTGGT
TTTACCATGA GTTTGTTTAT CGGCAGCTTA GCGTTTGAAG AGCAAGGTTT GGCTTATCAA
ACGAGTGTGA AAGCAGGGGT ATTGCTAGGG TCGTTAGTCT CAGCTGTGCT GGGCGCTGTG
TTGTTGGCCA GAAGTAATGC GAAATCAAAA GAGCGTGCTG AGCGAGAAGC TGCCAGAGAC
GCTTAA
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| Protein sequence | MQSYLGKLIQ HEAAGGVLLV IAAAIAMVLA NSPAYDFYNG LLEIPVSIRF GAFEIAKPLL
LWVNDGLMAI FFFLVGLEVK REVLGGQLSS VSQITLPAVA AIAGIVFPAL IYVWFNIDDP
VAVNGWAIPS ATDIAFAVGV FTIFGKFLPL SLKLFLLSVA IFDDIGAIVI IALFYSQDLS
TTSLIVACAG FVALFLLNRF NVRRQAAYVL IGVVVWAAVL KSGVHATLAG FALAWFIPLK
LKNEDGHPML PHLEHKLHPW VGFVVLPIFA FANAGVSLFG ASISDLLNPI TLGIAVGLFV
GKQLGIFGVC WITVKTGLAK LPDGSTWVQL YGVSLLCGIG FTMSLFIGSL AFEEQGLAYQ
TSVKAGVLLG SLVSAVLGAV LLARSNAKSK ERAEREAARD A
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