| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4193 |
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| Symbol | |
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| ID | 4175982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5050495 |
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| End bp | 5051628 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638057229 |
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| Product | beta-lactamase |
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| Protein accession | YP_663746 |
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| Protein GI | 109900491 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTTG TTGAAGTACA AGGTAGTTGG GATCCAAAGT TTGAGCCAGT GGTTGCAGCC
TTTAAAGCGA ATTTTGATCC GCAAAGTGCT ACGCCTGAGC AAGGTGCCGG ATTTTCTTTG
TTTCACCAAG GTACACCGGT GGTTGATATC TATGCAGGCA GCTATATCCA ATCAGGTGCT
TCAGCGCCTT GGCAGCAAGA CACGTTAGTC AATGTTTTCT CTACGACCAA GGGTGTTGCC
GCGTTATGTG TCGCGCATTT AGTCGAAAAA GGGCAGCTTC AGTACAGTGA CCGTGTAGCT
GAATATTGGC CTGAATTTGC AGCAAACGGT AAACAAGATA TGACCGTAGC TCAGGTGTTA
TCACATCAAA GTGGTTTGAA CGCCTTTGAC CTGCCGATAT CGGTTGGGGG CTTACTTGAC
TGGGATGATT GCTGCAAGCG ACTTGCCGCC CAAACGCCAT TTTTCCCGCC GGGGTCAAGA
ACCTGTTATC AGGCTGTCAC CTTTGGTTTT TTAGTGGGGG AAATTGTTCG AAGAGTGTCA
GGCGTTACGC TGGGGGAGTA TCTTAATAAA GAGCTCTGTC AGCCAAATAA TATCGACTTT
CACATCGGCT TGCCTGAAAG CCAACACGCT AGAGTTGCGG ATTTGCTGCC ACCAACGCGT
GCCCCTTATA TGCCTAAGAA CATGCCTGCT CATGCATTGA AGGGGATGAC AAACCCATTA
TTGCGTGCCG ATTTCATGCT TACCTCACAA GCGCGCCAAG CTGAGTTGCC TGCCATTAAT
GGTCATGGAA CCGCTGCGTC AATTGCGAGG TTGTACGAAC TTTACCGCCC TGAAAATGGT
TTCCTTAGTT CATCTACGCT CGCCAAAACC ACGGAGGTAA ACAGCACAAG AACGGATGAC
TTACTTGGCT TGCCCGTGCA CTGGGCCATG GGCTTAGTCG TCAATGCGTT AGCGAATACC
TATGGCAAAG AACCGAGTAC TTTTGGGCAC AGTGGTTGGG GTGGGTCGTT TGGCTGTCAT
GATCCAGCCA ACGGTTTATC TATCGGTTAC GTGTGCAGTC AAATGAGCCC AGATTTAGTG
GGTGATGCGC GCAGTCAGAG TTTGATTGAG CAAGCCTATG CGTGTTTAGG CTAA
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| Protein sequence | MSFVEVQGSW DPKFEPVVAA FKANFDPQSA TPEQGAGFSL FHQGTPVVDI YAGSYIQSGA
SAPWQQDTLV NVFSTTKGVA ALCVAHLVEK GQLQYSDRVA EYWPEFAANG KQDMTVAQVL
SHQSGLNAFD LPISVGGLLD WDDCCKRLAA QTPFFPPGSR TCYQAVTFGF LVGEIVRRVS
GVTLGEYLNK ELCQPNNIDF HIGLPESQHA RVADLLPPTR APYMPKNMPA HALKGMTNPL
LRADFMLTSQ ARQAELPAIN GHGTAASIAR LYELYRPENG FLSSSTLAKT TEVNSTRTDD
LLGLPVHWAM GLVVNALANT YGKEPSTFGH SGWGGSFGCH DPANGLSIGY VCSQMSPDLV
GDARSQSLIE QAYACLG
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