| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4191 |
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| Symbol | |
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| ID | 4175980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5048444 |
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| End bp | 5048968 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057227 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_663744 |
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| Protein GI | 109900489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTACAA TCGTATCTGT ACGTCGTGGT AACCAAGTTG TTATCGCTGG CGATGGCCAA
GTTTCACTTG GCAATACCGT AATGAAAGGC AACGCTAAAA AAGTGCGCCG CCTATATAAC
AACAAAGTCC TTGCTGGCTT TGCCGGTGGC ACCGCTGATG CCTTTACCTT ATTTGAGCGC
TTCGAATCAA AACTCGAAAT ACATCAAGGT AATTTAACCC GAGCTGCGGT CGAACTGGCC
AAAGATTGGC GAACGGACCG CATGTTACGC AAGCTAGAGG CCCTGCTCGC GGTAGCCGAT
GAAACCGCAT CTTTTATCAT CACCGGTAAC GGTGACGTTG TTCAGCCTGA AAATGACTTA
ATCGCCATTG GTTCAGGTGG CCCATTTGCC CAAGCTGCCG CGAGTGCATT GTTAGACAAC
ACAGAACTGT CCGCCGAGGA GATCGCTGAA AAAGCCTTAA CCATAGCCGG CAATATCTGT
GTGTTTACTA ACCATAATCA CACCGTAGAA AAAATCGATT ATTAA
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| Protein sequence | MTTIVSVRRG NQVVIAGDGQ VSLGNTVMKG NAKKVRRLYN NKVLAGFAGG TADAFTLFER
FESKLEIHQG NLTRAAVELA KDWRTDRMLR KLEALLAVAD ETASFIITGN GDVVQPENDL
IAIGSGGPFA QAAASALLDN TELSAEEIAE KALTIAGNIC VFTNHNHTVE KIDY
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