| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4189 |
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| Symbol | |
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| ID | 4175978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5045398 |
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| End bp | 5047575 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057225 |
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| Product | primosomal protein N' |
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| Protein accession | YP_663742 |
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| Protein GI | 109900487 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATTA TCCGCGTTGC CGTTCCTGTT CCTAAGCGCC AGTTTTTTGA GTACCAACAT
AGTAGCGCGC TAGAACCAGG TATTCGGGTA CGTGTGCCAT TTGGGCCGCG CAAACTAATT
GGTGTGGTGC TTGAAACCAC CGAAGAATCA CAATGGCAAA GCGACAAACT CAAAGCCATT
CTTGATGTAC TCGACGAAAC ATCCATATTC AGTTCAGTAC AACTTAAGCT ATGCCAATGG
CTCAGCCAGT ATTACCAACA TCCTATTGGC GACGTATTGC ATAGCGCTAT GCCTGTTTCC
TTACGTAAAG GCGGTTCGAG TCAACCTAAG CCAGTGAGCT TTTTACGTAC CACCGACGCA
GGCCAACAAA GCGCCCCTGA AAATTTAGGC AAGGCCCGCA AGCAACAGCA ACTACTTGCT
CAGTTACAAC AGGGCGAAGC TAGCTATTCC AGTATTCTTG CTCAATATGC TAGCACCACT
GTCAAGGCCC TAGTGCAAAA GACGTTAATT GAGCAGGTTG AGCGCATTCC TTCCCTTGAT
ACCCAATGGC TGGCCCACTT AAATATTGGC GAAAAACCAC TTCCGAATGT TGAGCAAGCC
ATAGCCATTA GCCAAATCAC GGCAAAAATA GGTGAATATG CGAGCTTTTT AATTGAAGGG
GTGACCGGCA GCGGCAAGAC CGAGGTTTAC CTGCAAGCAA TAGAAAGCGT GCTCACCCAA
GGTAAACAGG TACTTATTCT GGTACCAGAG ATCGGCTTAA CGCCGCAAAC CGTTGAGCGC
TTTGCCAAAC GCTTTAATGT ACTTGTGGGC ATATTACATT CTAATTTAAC CGACAATGAA
CGTTTACTGG TGTGGCAGCA GAGTCAGGCG GGGCAACTAC CAATCATTAT TGGCACCCGC
TCCGCTATTT TCACGCCAAT GAAAAACCCA GGCATGCTGA TTGTTGATGA AGAGCATGAC
TCATCTTACA AACAGCAAGA TGGTCTGCGT TACCACGCAA GAGATTTAGC GGTGATGCGC
GCCGCGCAAG AAAAAATTCC GCTTATTCTA GGCTCAGCCA CGCCCGCGCT TGAATCGTTG
AATAATGCGC TAAATGGCAA ATACCAACAC CTGCTTTTAA ATGAGCGCGC AGGCAATGCC
TCTCATCCTA AGCAACAAGT GCTGGATATT CGAAATCAGC CATTAGAATT TGGATTAGCG
AAAGGCATCA TCGAGCGGAT TGGCCAACAT TTGGCCCAAG AAAGTCAGGT GATGTTGTTT
ATTAACCGCC GAGGATATGC TCCTGCCCTT GTCTGCCATA CCTGCGGCCA TGTAGAAGAA
TGCCCTGGTT GCAACAAGCC TTACACCCTG CACAAACAAT TATATAAGTT GCAGTGCCAC
CATTGCGGCA GCGCCAAAGC AATACCTAAG CGTTGCCAAA GTTGCAACAG TACCGAGCTC
AGCGCTATGG GTTTAGGCAC AGAGCAACTC GAACAAGGCT TACAAACACT CTTCCCCCAA
TACACCAGTG TGCGTATCGA CAGCGACAGT GCCAGAGGTA AAAATCGCCT AAACGATATG
CTGGATAAAA TTAACCGTAA CGAGTATCAA ATATTAATTG GTACGCAGAT ATTGTCTAAG
GGTCACCATT TTCCCAATGT GACCTTAGTG GTAATCCTCG AAGTCGATGG CGCTTTGTTT
AGCGCCGATT ATCGCGCAGC TGAGCATTTA GCCCAACTAG TGACTCAGCT GGCTGGCCGC
GCAGGGCGTG CTGAAAAACC CGGGGAAATG TGGTTGCAAA CACATGACCC AAGCCACCCC
TTGTTGCAAG ATTTGCTCAA CAATGGCTAT TCGCACTTCG CTCGCTATGC CTTACTTGAA
CGTGAGCAAG CCATGCTACC GCCACATACT TACCAAGCGT TATTCAGAGC GCAATCAAGC
GACCCGCGCT TGGCGAATCA ATTGCTTATG GATATTTCCA TGCAGTTTAG CTATTCCAAG
CATGTACAGT GTATTGGCCC TTTGCCCGCA TTAATGGAAA AGCGCCAAGG GAAGTTTCGT
ATGCAATTGG TGCTAAGCAG TGGTAATCGC GCCGCTTTGC AACATGCCTT AAGTCAAGCC
ATGCCCAATA TTGAACAACT CCCTCTTGCC AGCAAAGTAC GCTGGGCGCT GGATGTAGAC
CCGCAAGATT TTATGTAA
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| Protein sequence | MPIIRVAVPV PKRQFFEYQH SSALEPGIRV RVPFGPRKLI GVVLETTEES QWQSDKLKAI
LDVLDETSIF SSVQLKLCQW LSQYYQHPIG DVLHSAMPVS LRKGGSSQPK PVSFLRTTDA
GQQSAPENLG KARKQQQLLA QLQQGEASYS SILAQYASTT VKALVQKTLI EQVERIPSLD
TQWLAHLNIG EKPLPNVEQA IAISQITAKI GEYASFLIEG VTGSGKTEVY LQAIESVLTQ
GKQVLILVPE IGLTPQTVER FAKRFNVLVG ILHSNLTDNE RLLVWQQSQA GQLPIIIGTR
SAIFTPMKNP GMLIVDEEHD SSYKQQDGLR YHARDLAVMR AAQEKIPLIL GSATPALESL
NNALNGKYQH LLLNERAGNA SHPKQQVLDI RNQPLEFGLA KGIIERIGQH LAQESQVMLF
INRRGYAPAL VCHTCGHVEE CPGCNKPYTL HKQLYKLQCH HCGSAKAIPK RCQSCNSTEL
SAMGLGTEQL EQGLQTLFPQ YTSVRIDSDS ARGKNRLNDM LDKINRNEYQ ILIGTQILSK
GHHFPNVTLV VILEVDGALF SADYRAAEHL AQLVTQLAGR AGRAEKPGEM WLQTHDPSHP
LLQDLLNNGY SHFARYALLE REQAMLPPHT YQALFRAQSS DPRLANQLLM DISMQFSYSK
HVQCIGPLPA LMEKRQGKFR MQLVLSSGNR AALQHALSQA MPNIEQLPLA SKVRWALDVD
PQDFM
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