| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4175 |
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| Symbol | |
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| ID | 4175964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5026210 |
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| End bp | 5027550 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057211 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_663728 |
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| Protein GI | 109900473 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCA CTACTTCTGC GCCGCGCTCA AGCGTTATGC CCATGTGCAT TATTGCACTG
CTGTTTTTCA TATTCGGCTT TGTAACTTGG TTAAACGGCG CACTGATCCC TTTTTTACAA
GTGGTGTGTC AGCTCTCTGA AACTCAAGCT CTGATGATTG CATCCTGCTT TTACTTTGCT
TACGTAGTGA TGGCGTTGCC CATGGCTATG ATCTTGGAAA AGGTCGGGTA TCAGTCATCC
ATGGTATTAG GGTTAAGCAT TATTGCCCTT GGCTTGCTTG GTTTTATCCC TGCAGCGTTA
CTGCAAGAAT TTTGGATCTT CCTGGTGGCG CAGTTCGTTA TTGGCAGCGG CTTAACCATC
TTACAAACTG CTGCTAACCC TTATGTGGTC AATGTCGGGC CAACCAAAAG TGCTGCTGCG
CGCATCGCGA TTATGGGGTT ACTCAATAAA GGCGCTGGTA TATTAGCGCC TATTCTTTTC
ACCGCATGGG TATTAGGCGG CTTTAGCGAC ATTAACCTAG CGACTGTCAA TCAGCTGCCT
GCAGAGCAAC AGCAATTGCA AATCGAAAGC ATGGCTCATC AATTGATTAC GCCATACGTG
GGTATGGCCA TTGCCTTGCT AGCATTAGCC GGTGGTTTGT CGCGTATTTC GCTGCCCGAT
TTGGCTTTAC TAGAGTCTCC TGTCAATGAC GAGTCAGACG CGCTTGAAGA TAGCGCTCGT
CATCAAACTA AAAGCGTAAT TTGGCAATTT CCCCAGCTAG TGCTTGGCGC CATCGCACTG
TTCTTTTATG TGGGGGTGGA AGTTATCGCC GGCGACACGA TTGGTTTATA TGGTGCGAGC
ATAGGAGTCG CTAACGCCAC CACGCTCACG TCATATACCA TGGGCTTTAT GGTGTTGGGT
TACTTTCTTG GCTTGGTGTG TATCCCACGC TTTGTATCAC AAGCAAATGC CCTGCGCATC
AGTGCCATTG GCGGTTTGGT CATTACCGTT TTATTGCTGT TCTCGTCAAA TGAGCAAACC
ATGCTAGCGC AATTACTTTG GGGATGGACC GGGATCGCCG TGATCCCAAA CAGCGTCGCG
TTAATTGCCC TACTGGGCTT GGCCAATGCC ATGGTGTGGC CAACGCTGTG GCCTTTAGCC
CTGGCGGATT TGGGGCGTTT TACCCCAAAA GGCTCTGCGA TTTTAATCAT GGGTATTGCT
GGGGGCGCGC TGATGCCAAT TATCTATGGG CAATTGGCTC AAGCGAGTAA TAGCCAACAA
GCTTATTGGA TATTATTGCC AGGGTATTTA ATGATAGGTT TTTACGCATT TTATGGTCAC
AAAATGCGTA GTTGGTCGTA A
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| Protein sequence | MTLTTSAPRS SVMPMCIIAL LFFIFGFVTW LNGALIPFLQ VVCQLSETQA LMIASCFYFA
YVVMALPMAM ILEKVGYQSS MVLGLSIIAL GLLGFIPAAL LQEFWIFLVA QFVIGSGLTI
LQTAANPYVV NVGPTKSAAA RIAIMGLLNK GAGILAPILF TAWVLGGFSD INLATVNQLP
AEQQQLQIES MAHQLITPYV GMAIALLALA GGLSRISLPD LALLESPVND ESDALEDSAR
HQTKSVIWQF PQLVLGAIAL FFYVGVEVIA GDTIGLYGAS IGVANATTLT SYTMGFMVLG
YFLGLVCIPR FVSQANALRI SAIGGLVITV LLLFSSNEQT MLAQLLWGWT GIAVIPNSVA
LIALLGLANA MVWPTLWPLA LADLGRFTPK GSAILIMGIA GGALMPIIYG QLAQASNSQQ
AYWILLPGYL MIGFYAFYGH KMRSWS
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