Gene Patl_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4174 
Symbol 
ID4175963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp5025063 
End bp5026193 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID638057210 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_663727 
Protein GI109900472 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA GATGTGAGCG CTTACTGACC TCAAACGGCT GGTTGAATAA CCAAACTGTA 
ATCGTTGAAC AAGACACCAT CCAAAATATA ACAGCAACAT CTTCTAATGA CGCCCATTTG 
GCGTTTTACC CCGGTTCAGT GGTACCTGGT TTTATCGATG TACAAGTTAA CGGTGGTGGT 
GGTGTACTGT TTAACCAGTC ACCTACCACA GCAGCTTTAG CGCAAATGAG CCTAGCTCAT 
CGCAAATTTG GTACCACAGG GTTAATGCCA ACATTGATCA CGGATGAACT GCCTGTCATG 
CAACACGCAG CACAGATTAT GGCTGAGGCC ATTGACCAAC ATGTGGCTGG GATCCTTGGG 
GTGCATTTTG AAGGACCACA CTTAAGCAAA CCGAAAAAAG GCGTGCATGA TGAAGCCTTT 
ATTCGCCCTA TCACAGATGA TGAATTAGCC CTTTATTTAC GCAAAGATTT GGGGAAAGTG 
ATTGTGACAC TTGCTCCTGA AAATGTTAGC CCAGACGTGA TTACACAATT GTGCCAGCAT 
GGAGTGAAAG TATGCCTAGG CCACTCTAAC GCTGATGCAG AAACCGTACT CAAGGCAATT 
GAGGCCGGCG CAGATGGGTT CACTCACTTA TTCAACGCTA TGTCAGCCAT GCTGTCACGC 
GCACCTGGCA TGGTAGGGGT GGCGCTAAAT ACACCAGATA CCTATGCGGG CTTAATTCTA 
GATCATTACC ACATTGACCC AATTTGCAGT GAAATAGCGA TTAAAATCAA AGGGAAAGAA 
AGAATGATGC TGGTTACCGA TGCCATGGGA TTAATCGGCA CTGACGATGA CAGCTTTATG 
TTCGGTACAC AGAAGGTCAC GCGCGTTGGC AATAAACTAA CCACAGATAA CGGTACGCTA 
GCAGGCTCCC ATTTAGACAT GCTTAGCGCA ATCAAAAATG CGGTGCGCGA TTTACATATT 
CCTCTTGAAG ACGCCATCAC AATGGCCAGT ACCACACCTG CTCATTATCT TGGTTTACAA 
GACACCCATG GCGTTATTGC CAAAGGCAAA AAAGCGGACT TTGTTGTACT AGATGATGCG 
CTAAATATCA CGGCATTATG CCAATCAGGT CAATTCATTC CACAATCATA A
 
Protein sequence
MQFRCERLLT SNGWLNNQTV IVEQDTIQNI TATSSNDAHL AFYPGSVVPG FIDVQVNGGG 
GVLFNQSPTT AALAQMSLAH RKFGTTGLMP TLITDELPVM QHAAQIMAEA IDQHVAGILG 
VHFEGPHLSK PKKGVHDEAF IRPITDDELA LYLRKDLGKV IVTLAPENVS PDVITQLCQH 
GVKVCLGHSN ADAETVLKAI EAGADGFTHL FNAMSAMLSR APGMVGVALN TPDTYAGLIL 
DHYHIDPICS EIAIKIKGKE RMMLVTDAMG LIGTDDDSFM FGTQKVTRVG NKLTTDNGTL 
AGSHLDMLSA IKNAVRDLHI PLEDAITMAS TTPAHYLGLQ DTHGVIAKGK KADFVVLDDA 
LNITALCQSG QFIPQS