| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4169 |
|---|
| Symbol | |
|---|
| ID | 4175958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 5018860 |
|---|
| End bp | 5019747 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638057205 |
|---|
| Product | ATPase, BadF/BadG/BcrA/BcrD type |
|---|
| Protein accession | YP_663722 |
|---|
| Protein GI | 109900467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0976087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATT CAATTCAATT CATACTTGGC TTAGACGGCG GGGGCACAAA AACGGTTGCC
CGGCTCGTTG ACTTACAAAC CTCAATGCAG TGGCAAGTGA ATGCTGGGGC AACGTCTCTG
AGTAATGATT ACTCCTTGGC GTTAGCCAGT ATTACAGATG CTTGCAGGCA ATTATTAGAG
CAGGCGGACT GCAGCGCCGA GCAGGTATCG GCTGTGTTTG GTGTCGCCGG TGCCGGGGAT
AAATCCTTGG TGGTTAAATT AGAGCGAGAT TTAGCCTTCA AATTTGCCAA ATTAAGTGTG
GTGTCTGATG CCAAGACCTC CTTGTACGGC GCTAATGCTG GCCATCCAGT GGCTGTTGTA
GCACTCGGGA CAGGGTCGGT TGGTATGCGT ATGGATCATA ACCGCAACGA AAAGATGATA
GGCGGGTGGG GCTTTTGTAT CGGTGATGAA GGTGGCGGTG CGAAACTTGG CTACTTAGCG
GTTCAAAAGT TGCTGTTGGA AATGGACTTG AATGGGGTAG CAAAAAGCAC GTTAAGTTTG
TTTGTGGCCA GCCAAATTGG TTACAGTCGC CATTCAATCT TGCAATGGTT AGCGATGGCG
AAACCAGCTG ATTTCGCAGC GCTTGCGCCA CATGTTTTCA ACCTAAAAGA AGAGTGTGTG
GTGGCGTTAG AAGTACTCAC TGCCCATGCC ACCATGATCG AAAAATTAAT CAAGCGTACC
TGCGGCTCAA GTGATTTACC CTTGGTGCTC ATGGGTGGTC TGGCTGAACC GAGCCAAGGA
CTGCTAAGTG CGACTTATCG CAATTTAATT GTGCCAAGTA AGGGAAACTC TCTTGATGGC
GCTTGTTTGT TGGCAAAGCA ATTGTGCTCG CCTTCATCCA CTAACTAA
|
|---|
| Protein sequence | MNHSIQFILG LDGGGTKTVA RLVDLQTSMQ WQVNAGATSL SNDYSLALAS ITDACRQLLE
QADCSAEQVS AVFGVAGAGD KSLVVKLERD LAFKFAKLSV VSDAKTSLYG ANAGHPVAVV
ALGTGSVGMR MDHNRNEKMI GGWGFCIGDE GGGAKLGYLA VQKLLLEMDL NGVAKSTLSL
FVASQIGYSR HSILQWLAMA KPADFAALAP HVFNLKEECV VALEVLTAHA TMIEKLIKRT
CGSSDLPLVL MGGLAEPSQG LLSATYRNLI VPSKGNSLDG ACLLAKQLCS PSSTN
|
|---|
| |