Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4154 |
Symbol | |
ID | 4175943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4994892 |
End bp | 4996373 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638057190 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_663707 |
Protein GI | 109900452 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTTA AACGCCTATT TGGTAATACC ACTGCGACTT GGATCATTAT TTCCATCATA GTGGTGGGCA TCATAGGGAC AAATCTATCC ATTGCATTAA ACACGGTTAA TCAGCTTTCT ACCGTGCAAA CCGACCTAGA TAAAACCAGC AATATTATTG TACGCCTCGA AAGCCTGCAT TTGTCCGTAG TGGTCGCCGA ATCAGGCCAG CGTGGGTATC TATTGACCGA GTATGAAGAA TACCTCAACC CTTATCATGC TGAATTGCAG ACCCTTGATG AGAAAATTGC GTTAGTCAAA AACATCAAAT CAGGTGTAGC GGGGCAAAAA GAGCGTATTG ACGAACTGCT GATACTCGTA AATGAGAAAA TCACAGAGCT CACCTCCACA GTGGATTTAG CCTTAGAAGA TCGAGAGAAG TCGGCGCTTA GGCAGATTAT GACCAACCGA GGGCGTGATC TTTACCGTGA AATCCGTAAA TCTATGCAGC AGTTAATCGA CAGTGAATAT CAGCATAGGC AAGCACTGTA CACTCAGTTA AAAAGAATAC AGCGCGACGC CAAAGTCAAC TTTGGGGTAT CGGCTATCAC TAGCGGTTTG TTGGTTATCG GCATGTTTTT AATGGCTCGC ATTAATTTAC GAATTAGCAA TCGCTATCAA GACGACCTTG AAGAGCAGAA TGAGTCATTG CAGGAGAAGG TCGATCTGCG CACTCAAGAG TTAACCGTCT ACTCAGAGGA ACTCAGCCGA AGTAACCGAG AGTTAGAAGA TTTTGCGTTT GTCGCCTCCC ATGACTTACA AGAGCCTTTG CGAAAAATTC AAGCCTTCAG CGATCGCCTG ACCACTATTT ATAAAGACCA ATTGGACGAG CGCGGTGTCG ATTACATTAA GCGAATGACC ACAGCTGCTT TTCGAATGTC GACTTTAATT AACGACCTGC TAGAGTTTTC CAGAATTACC ACACGTGGAA AAGAGTTTGT TGAGGTTGAA TTAAACAGTG TCCTAGATGA AGTCTTAAAC GACTTAGAAA TTGCCATTGC TGAGACAGAT GCGCAAATCG ACGTCGCTCC ATTACCAAAA GTGTGTGCAG ATCCTAGTCA GATGTATCAG TTGTTTCTTA ACGTATTATC AAACGGATTA AAGTTTCACA AAACGGACGT TGCACCTGTG ATCACTGTAT CAGTTGAGCA AAAAGACTTG CGTGATGAAC TTCAACATGT TGATGTGCCA AGTTGCATTG TGACGATCAA AGATAATGGT ATCGGTTTTG AGCAAACCTA TGCGGATAAA ATATTTTCAC CTTTTCAGCG ACTTCATGGT CGCACAGCGT ACAAAGGAAC GGGAATTGGT TTGGCGGTGT GTCGCCGCAT TGTTGAGCGT CATGGTGGTA CCATCACAGC GCTAAGTAGT CCCGATGAAG GGGCTGAGTT TACCATCACC TTGCCGATTG ACGCCGTTGT TAACAAATAT ATGGGAGAGT AG
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Protein sequence | MHVKRLFGNT TATWIIISII VVGIIGTNLS IALNTVNQLS TVQTDLDKTS NIIVRLESLH LSVVVAESGQ RGYLLTEYEE YLNPYHAELQ TLDEKIALVK NIKSGVAGQK ERIDELLILV NEKITELTST VDLALEDREK SALRQIMTNR GRDLYREIRK SMQQLIDSEY QHRQALYTQL KRIQRDAKVN FGVSAITSGL LVIGMFLMAR INLRISNRYQ DDLEEQNESL QEKVDLRTQE LTVYSEELSR SNRELEDFAF VASHDLQEPL RKIQAFSDRL TTIYKDQLDE RGVDYIKRMT TAAFRMSTLI NDLLEFSRIT TRGKEFVEVE LNSVLDEVLN DLEIAIAETD AQIDVAPLPK VCADPSQMYQ LFLNVLSNGL KFHKTDVAPV ITVSVEQKDL RDELQHVDVP SCIVTIKDNG IGFEQTYADK IFSPFQRLHG RTAYKGTGIG LAVCRRIVER HGGTITALSS PDEGAEFTIT LPIDAVVNKY MGE
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